RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
SF1-201ENST00000227503 CAPN2P17655 700 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 KCNA6P17658 529 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 POLA2Q14181 598 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 FBXO38Q6PIJ6 1188 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 NECAB1Q8N987 351 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 IPO4Q8TEX9 1081 aaKnown RBP16.73■□□□□ 0.27
SF1-201ENST00000227503 SPG7Q9UQ90 795 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 KRT222Q8N1A0 295 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
SF1-201ENST00000227503 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
SF1-201ENST00000227503 A0A087WWV3 80 aa16.72■□□□□ 0.27
SF1-201ENST00000227503 PPP1R42Q7Z4L9 355 aa16.72■□□□□ 0.27
SF1-201ENST00000227503 SNX14Q9Y5W7 946 aa16.72■□□□□ 0.27
SF1-201ENST00000227503 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
SF1-201ENST00000227503 RAB11FIP3O75154 756 aa16.71■□□□□ 0.27
SF1-201ENST00000227503 CEP135Q66GS9 1140 aa16.71■□□□□ 0.27
SF1-201ENST00000227503 GTF3C6Q969F1 213 aa16.71■□□□□ 0.27
SF1-201ENST00000227503 MTMR6Q9Y217 621 aa16.71■□□□□ 0.27
SF1-201ENST00000227503 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
SF1-201ENST00000227503 HSPA4P34932 840 aa16.71■□□□□ 0.27
SF1-201ENST00000227503 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
SF1-201ENST00000227503 COL9A3Q14050 684 aaPredicted RBP16.71■□□□□ 0.27
SF1-201ENST00000227503 ZBTB9Q96C00 473 aa16.71■□□□□ 0.27
SF1-201ENST00000227503 TFIP11Q9UBB9 837 aaKnown RBP16.71■□□□□ 0.27
SF1-201ENST00000227503 TPM3P06753 285 aa16.71■□□□□ 0.26
SF1-201ENST00000227503 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.26
SF1-201ENST00000227503 TIGD1Q96MW7 591 aa16.71■□□□□ 0.26
SF1-201ENST00000227503 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
SF1-201ENST00000227503 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
SF1-201ENST00000227503 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 NUP62CLQ9H1M0 184 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 MED1Q15648 1581 aaPredicted RBP16.7■□□□□ 0.26
SF1-201ENST00000227503 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
SF1-201ENST00000227503 ZNF75DP51815 510 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 DACT1Q9NYF0 836 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 CLIP2Q9UDT6 1046 aa16.7■□□□□ 0.26
SF1-201ENST00000227503 LRRN4CLQ8ND94 238 aa16.69■□□□□ 0.26
SF1-201ENST00000227503 TTC14Q96N46 770 aa16.69■□□□□ 0.26
SF1-201ENST00000227503 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
SF1-201ENST00000227503 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
SF1-201ENST00000227503 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
SF1-201ENST00000227503 IP6K1Q92551 441 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 ZNF446Q9NWS9 450 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 CCDC66A2RUB6 948 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
SF1-201ENST00000227503 ADCK5Q3MIX3 580 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
SF1-201ENST00000227503 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 ZNF397Q8NF99 534 aaPredicted RBP16.67■□□□□ 0.26
SF1-201ENST00000227503 FBXW7Q969H0 707 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 TCEANC2Q96MN5 208 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 RAD50Q92878 1312 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 LTN1O94822 1766 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 SGSM2O43147 1006 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 HOXB7P09629 217 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 PDIA4P13667 645 aaKnown RBP16.67■□□□□ 0.26
SF1-201ENST00000227503 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
SF1-201ENST00000227503 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
SF1-201ENST00000227503 ERBB3P21860 1342 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 KCNQ3O43525 872 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 FILIP1Q7Z7B0 1213 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 ZFP91Q96JP5 570 aaPredicted RBP16.66■□□□□ 0.26
SF1-201ENST00000227503 NFAT5O94916 1531 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 PAXBP1Q9Y5B6 917 aa16.66■□□□□ 0.26
SF1-201ENST00000227503 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 PLA2G4DQ86XP0 818 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 SYCP1Q15431 976 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
SF1-201ENST00000227503 ATP6V1DQ9Y5K8 247 aa16.65■□□□□ 0.26
SF1-201ENST00000227503 ZNF165P49910 485 aa16.64■□□□□ 0.25
SF1-201ENST00000227503 JAKMIP1Q96N16 626 aaKnown RBP16.64■□□□□ 0.25
SF1-201ENST00000227503 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
SF1-201ENST00000227503 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
SF1-201ENST00000227503 ADCY9O60503 1353 aa16.64■□□□□ 0.25
SF1-201ENST00000227503 FER1L4A9Z1Z3 1794 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 NR1I2O75469 434 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 PTPN14Q15678 1187 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 ERCC6LQ2NKX8 1250 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 HYPKQ9NX55 129 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 ME3Q16798 604 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 ANXA1P04083 346 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms