RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 PPP1R42Q7Z4L9 355 aa27.76■■■□□ 2.03
SLC25A39-201ENST00000225308 BRIP1Q9BX63 1249 aa27.76■■■□□ 2.03
SLC25A39-201ENST00000225308 DNAAF4Q8WXU2 420 aa27.75■■■□□ 2.03
SLC25A39-201ENST00000225308 F6X3S4 739 aa27.74■■■□□ 2.03
SLC25A39-201ENST00000225308 UTP14AQ9BVJ6 771 aaKnown RBP27.74■■■□□ 2.03
SLC25A39-201ENST00000225308 A0A0G2JLW4 131 aa27.74■■■□□ 2.03
SLC25A39-201ENST00000225308 IGKV5-2P06315 115 aa27.74■■■□□ 2.03
SLC25A39-201ENST00000225308 BRPF1P55201 1214 aaPredicted RBP27.74■■■□□ 2.03
SLC25A39-201ENST00000225308 ERFEQ4G0M1 354 aa27.74■■■□□ 2.03
SLC25A39-201ENST00000225308 DPEP1P16444 411 aa27.73■■■□□ 2.03
SLC25A39-201ENST00000225308 GTF2E1P29083 439 aaPredicted RBP27.73■■■□□ 2.03
SLC25A39-201ENST00000225308 RNF123Q5XPI4 1314 aa27.72■■■□□ 2.03
SLC25A39-201ENST00000225308 RIC1Q4ADV7 1423 aa27.72■■■□□ 2.03
SLC25A39-201ENST00000225308 TRMT112Q9UI30 125 aaKnown RBP27.72■■■□□ 2.03
SLC25A39-201ENST00000225308 PTPRCP08575 1304 aa27.72■■■□□ 2.03
SLC25A39-201ENST00000225308 DDX60Q8IY21 1712 aaKnown RBP27.72■■■□□ 2.03
SLC25A39-201ENST00000225308 KCNA3P22001 575 aa27.71■■■□□ 2.03
SLC25A39-201ENST00000225308 CHRNA5P30532 468 aa27.71■■■□□ 2.03
SLC25A39-201ENST00000225308 NEXNQ0ZGT2 675 aa27.71■■■□□ 2.03
SLC25A39-201ENST00000225308 CCDC191Q8NCU4 936 aa27.71■■■□□ 2.03
SLC25A39-201ENST00000225308 LAMB2P55268 1798 aa27.71■■■□□ 2.03
SLC25A39-201ENST00000225308 CWF19L2Q2TBE0 894 aaKnown RBP27.7■■■□□ 2.03
SLC25A39-201ENST00000225308 SYNE4Q8N205 404 aa27.7■■■□□ 2.03
SLC25A39-201ENST00000225308 PDE6BP35913 854 aa27.7■■■□□ 2.02
SLC25A39-201ENST00000225308 SH3TC1Q8TE82 1336 aa27.69■■■□□ 2.02
SLC25A39-201ENST00000225308 KLRG2A4D1S0 409 aaPredicted RBP27.69■■■□□ 2.02
SLC25A39-201ENST00000225308 NEURL1BA8MQ27 555 aa27.69■■■□□ 2.02
SLC25A39-201ENST00000225308 CWC25Q9NXE8 425 aaPredicted RBP27.69■■■□□ 2.02
SLC25A39-201ENST00000225308 LINS1Q8NG48 757 aa27.68■■■□□ 2.02
SLC25A39-201ENST00000225308 BCAR3O75815 825 aa27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 FAM89AQ96GI7 184 aa27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 WWC3Q9ULE0 1092 aa27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 SLC10A5Q5PT55 438 aa27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 BEND3Q5T5X7 828 aa27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 C2CD5Q86YS7 1000 aa27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 NOB1Q9ULX3 412 aaKnown RBP27.67■■■□□ 2.02
SLC25A39-201ENST00000225308 CACNA1SQ13698 1873 aa27.66■■■□□ 2.02
SLC25A39-201ENST00000225308 KIF16BQ96L93 1317 aa27.66■■■□□ 2.02
SLC25A39-201ENST00000225308 H0YIN7 160 aa27.66■■■□□ 2.02
SLC25A39-201ENST00000225308 ZBTB38Q8NAP3 1195 aaPredicted RBP27.66■■■□□ 2.02
SLC25A39-201ENST00000225308 RTL5Q5HYW3 569 aaPredicted RBP27.65■■■□□ 2.02
SLC25A39-201ENST00000225308 PDZRN3Q9UPQ7 1066 aa27.65■■■□□ 2.02
SLC25A39-201ENST00000225308 ARFGEF1Q9Y6D6 1849 aa27.65■■■□□ 2.02
SLC25A39-201ENST00000225308 SRGNP10124 158 aa27.64■■■□□ 2.02
SLC25A39-201ENST00000225308 HCLS1P14317 486 aaPredicted RBP27.64■■■□□ 2.02
SLC25A39-201ENST00000225308 CRY2Q49AN0 593 aa27.64■■■□□ 2.02
SLC25A39-201ENST00000225308 SLC4A10Q6U841 1118 aa27.64■■■□□ 2.02
SLC25A39-201ENST00000225308 C3orf67Q6ZVT6 689 aa27.64■■■□□ 2.02
SLC25A39-201ENST00000225308 PCCAP05165 728 aaPredicted RBP27.63■■■□□ 2.01
SLC25A39-201ENST00000225308 GCKRQ14397 625 aa27.63■■■□□ 2.01
SLC25A39-201ENST00000225308 PIM2Q9P1W9 311 aa27.63■■■□□ 2.01
SLC25A39-201ENST00000225308 MYH3P11055 1940 aa27.63■■■□□ 2.01
SLC25A39-201ENST00000225308 YBX3P16989 372 aaKnown RBP eCLIP27.62■■■□□ 2.013e-13■□□□□ 10.5
SLC25A39-201ENST00000225308 JARID2Q92833 1246 aaPredicted RBP27.61■■■□□ 2.01
SLC25A39-201ENST00000225308 SLX4Q8IY92 1834 aa27.61■■■□□ 2.01
SLC25A39-201ENST00000225308 ARHGAP45Q92619 1136 aa27.6■■■□□ 2.01
SLC25A39-201ENST00000225308 IRS4O14654 1257 aaPredicted RBP27.59■■■□□ 2.01
SLC25A39-201ENST00000225308 PELP1Q8IZL8 1130 aaKnown RBP27.59■■■□□ 2.01
SLC25A39-201ENST00000225308 MASTLQ96GX5 879 aa27.59■■■□□ 2.01
SLC25A39-201ENST00000225308 NLRP3Q96P20 1036 aa27.59■■■□□ 2.01
SLC25A39-201ENST00000225308 SRCIN1Q9C0H9 1055 aa27.59■■■□□ 2.01
SLC25A39-201ENST00000225308 STYK1Q6J9G0 422 aa27.59■■■□□ 2.01
SLC25A39-201ENST00000225308 CDHR2Q9BYE9 1310 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 H7C1W4 665 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 ALDH1L1O75891 902 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 NPR1P16066 1061 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 GPR162Q16538 588 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 UBE3BQ7Z3V4 1068 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 ZNF622Q969S3 477 aaKnown RBP eCLIP27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 API5Q9BZZ5 524 aaKnown RBP27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 BCS1LQ9Y276 419 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 TAF1P21675 1872 aa27.58■■■□□ 2.01
SLC25A39-201ENST00000225308 DALRD3Q5D0E6 543 aaKnown RBP27.57■■■□□ 2
SLC25A39-201ENST00000225308 TTLL6Q8N841 843 aa27.57■■■□□ 2
SLC25A39-201ENST00000225308 FRAT1Q92837 279 aaPredicted RBP27.57■■■□□ 2
SLC25A39-201ENST00000225308 CASP7P55210 303 aa27.56■■■□□ 2
SLC25A39-201ENST00000225308 TRIM27P14373 513 aa27.56■■■□□ 2
SLC25A39-201ENST00000225308 HOXA10P31260 410 aaPredicted RBP27.56■■■□□ 2
SLC25A39-201ENST00000225308 IPO8O15397 1037 aaKnown RBP27.55■■■□□ 2
SLC25A39-201ENST00000225308 ATF7IPQ6VMQ6 1270 aa27.55■■■□□ 2
SLC25A39-201ENST00000225308 RPGRQ92834 1020 aaKnown RBP27.55■■■□□ 2
SLC25A39-201ENST00000225308 RCAN3Q9UKA8 241 aa27.55■■■□□ 2
SLC25A39-201ENST00000225308 ABCC4O15439 1325 aa27.54■■■□□ 2
SLC25A39-201ENST00000225308 CNKSR1Q969H4 720 aa27.54■■■□□ 2
SLC25A39-201ENST00000225308 TNNQ9UQP3 1299 aa27.54■■■□□ 2
SLC25A39-201ENST00000225308 GRM8O00222 908 aa27.53■■■□□ 2
SLC25A39-201ENST00000225308 HSP90B1P14625 803 aaKnown RBP27.52■■■□□ 2
SLC25A39-201ENST00000225308 SF3B3Q15393 1217 aaKnown RBP27.52■■■□□ 2
SLC25A39-201ENST00000225308 PRPF40BQ6NWY9 871 aaKnown RBP27.52■■■□□ 2
SLC25A39-201ENST00000225308 DCAF8L1A6NGE4 600 aa27.52■■■□□ 2
SLC25A39-201ENST00000225308 PDE8AO60658 829 aa27.52■■■□□ 2
SLC25A39-201ENST00000225308 ZKSCAN2Q63HK3 967 aa27.52■■■□□ 2
SLC25A39-201ENST00000225308 C9orf78Q9NZ63 289 aaPredicted RBP27.51■■□□□ 1.99
SLC25A39-201ENST00000225308 COL4A1P02462 1669 aa27.5■■□□□ 1.99
SLC25A39-201ENST00000225308 CCT4P50991 539 aaKnown RBP27.5■■□□□ 1.99
SLC25A39-201ENST00000225308 ALDH1B1P30837 517 aa27.49■■□□□ 1.99
SLC25A39-201ENST00000225308 RBM17Q96I25 401 aaKnown RBP27.49■■□□□ 1.99
SLC25A39-201ENST00000225308 CRAMP1Q96RY5 1269 aa27.49■■□□□ 1.99
SLC25A39-201ENST00000225308 PLA2G12BQ9BX93 195 aa27.49■■□□□ 1.99
SLC25A39-201ENST00000225308 UTYO14607 1347 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms