RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ZSWIM6Q9HCJ5 1215 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 COPRSQ9NQ92 184 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 CYP46A1Q9Y6A2 500 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 MYL6BP14649 208 aa25.27■■□□□ 1.64
CCDC130-201ENST00000221554 RASEFQ8IZ41 740 aa25.27■■□□□ 1.64
CCDC130-201ENST00000221554 EAF2Q96CJ1 260 aaPredicted RBP25.27■■□□□ 1.64
CCDC130-201ENST00000221554 SPATA31A3Q5VYP0 1347 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 CCDC171Q6TFL3 1326 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 PSMA5P28066 241 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 NECTIN1Q15223 517 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 LRSAM1Q6UWE0 723 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 MYD88Q99836 296 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 ESPNB1AK53 854 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 PHF14O94880 888 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 RNF20Q5VTR2 975 aa25.26■■□□□ 1.63
CCDC130-201ENST00000221554 AHDC1Q5TGY3 1603 aaPredicted RBP25.25■■□□□ 1.63
CCDC130-201ENST00000221554 CASTP20810 708 aaKnown RBP25.25■■□□□ 1.63
CCDC130-201ENST00000221554 CABP4P57796 275 aa25.25■■□□□ 1.63
CCDC130-201ENST00000221554 LRP10Q7Z4F1 713 aa25.25■■□□□ 1.63
CCDC130-201ENST00000221554 MAP4K1Q92918 833 aa25.25■■□□□ 1.63
CCDC130-201ENST00000221554 PDRG1Q9NUG6 133 aa25.25■■□□□ 1.63
CCDC130-201ENST00000221554 TMEM87AQ8NBN3 555 aa25.24■■□□□ 1.63
CCDC130-201ENST00000221554 SMC3Q9UQE7 1217 aa25.24■■□□□ 1.63
CCDC130-201ENST00000221554 RABL6Q3YEC7 729 aaPredicted RBP25.23■■□□□ 1.63
CCDC130-201ENST00000221554 HS1BP3Q53T59 392 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 RUFY3Q7L099 469 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 PARP4Q9UKK3 1724 aaKnown RBP25.23■■□□□ 1.63
CCDC130-201ENST00000221554 CYP27B1O15528 508 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 PTH1RQ03431 593 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 CSPP1Q1MSJ5 1256 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 TICAM2Q86XR7 235 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 PLBD2Q8NHP8 589 aa25.23■■□□□ 1.63
CCDC130-201ENST00000221554 RFX7Q2KHR2 1363 aa25.22■■□□□ 1.63
CCDC130-201ENST00000221554 COL16A1Q07092 1604 aaPredicted RBP25.22■■□□□ 1.63
CCDC130-201ENST00000221554 ZSCAN22P10073 491 aaPredicted RBP25.22■■□□□ 1.63
CCDC130-201ENST00000221554 ANKRD1Q15327 319 aa25.22■■□□□ 1.63
CCDC130-201ENST00000221554 PRPF40BQ6NWY9 871 aaKnown RBP25.22■■□□□ 1.63
CCDC130-201ENST00000221554 FBXO41Q8TF61 875 aa25.22■■□□□ 1.63
CCDC130-201ENST00000221554 JAKMIP1Q96N16 626 aaKnown RBP25.22■■□□□ 1.63
CCDC130-201ENST00000221554 ALDH8A1Q9H2A2 487 aaPredicted RBP25.22■■□□□ 1.63
CCDC130-201ENST00000221554 FOXD4L5Q5VV16 416 aaPredicted RBP25.21■■□□□ 1.63
CCDC130-201ENST00000221554 FOXD4L4Q8WXT5 416 aaPredicted RBP25.21■■□□□ 1.63
CCDC130-201ENST00000221554 CCDC8Q9H0W5 538 aaPredicted RBP25.21■■□□□ 1.63
CCDC130-201ENST00000221554 TMEM63CQ9P1W3 806 aa25.21■■□□□ 1.63
CCDC130-201ENST00000221554 USP16Q9Y5T5 823 aa25.21■■□□□ 1.63
CCDC130-201ENST00000221554 ATP5JP18859 108 aa25.21■■□□□ 1.63
CCDC130-201ENST00000221554 KCNJ4P48050 445 aa25.21■■□□□ 1.63
CCDC130-201ENST00000221554 HMG20BQ9P0W2 317 aa25.21■■□□□ 1.63
CCDC130-201ENST00000221554 STX6O43752 255 aa25.2■■□□□ 1.62
CCDC130-201ENST00000221554 FSD1Q9BTV5 496 aa25.2■■□□□ 1.62
CCDC130-201ENST00000221554 RBM8AQ9Y5S9 174 aaKnown RBP25.2■■□□□ 1.62
CCDC130-201ENST00000221554 LETM1O95202 739 aaPredicted RBP25.19■■□□□ 1.62
CCDC130-201ENST00000221554 PRIM1P49642 420 aaKnown RBP25.19■■□□□ 1.62
CCDC130-201ENST00000221554 NMIQ13287 307 aaPredicted RBP25.19■■□□□ 1.62
CCDC130-201ENST00000221554 CREB3L3Q68CJ9 461 aa25.19■■□□□ 1.62
CCDC130-201ENST00000221554 RPAP1Q9BWH6 1393 aaPredicted RBP25.19■■□□□ 1.62
CCDC130-201ENST00000221554 LAMB4A4D0S4 1761 aa25.19■■□□□ 1.62
CCDC130-201ENST00000221554 ERVV-2B6SEH9 535 aa25.18■■□□□ 1.62
CCDC130-201ENST00000221554 RFX5P48382 616 aaPredicted RBP25.18■■□□□ 1.62
CCDC130-201ENST00000221554 TSGA10IPQ3SY00 556 aa25.18■■□□□ 1.62
CCDC130-201ENST00000221554 SIL1Q9H173 461 aa25.18■■□□□ 1.62
CCDC130-201ENST00000221554 RBSNQ9H1K0 784 aa25.18■■□□□ 1.62
CCDC130-201ENST00000221554 PCDH11XQ9BZA7 1347 aa25.17■■□□□ 1.62
CCDC130-201ENST00000221554 PCDH11YQ9BZA8 1340 aa25.17■■□□□ 1.62
CCDC130-201ENST00000221554 BOLA2Q9H3K6 86 aa25.17■■□□□ 1.62
CCDC130-201ENST00000221554 RBM27Q9P2N5 1060 aaKnown RBP25.17■■□□□ 1.62
CCDC130-201ENST00000221554 SYT1P21579 422 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 HSPA1LP34931 641 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 SOS2Q07890 1332 aaPredicted RBP25.16■■□□□ 1.62
CCDC130-201ENST00000221554 JCADQ9P266 1359 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 MED23Q9ULK4 1368 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 PTPN12Q05209 780 aaKnown RBP25.16■■□□□ 1.62
CCDC130-201ENST00000221554 KRT32Q14532 448 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 TNNI3KQ59H18 835 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 EPHA10Q5JZY3 1008 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 USP48Q86UV5 1035 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 CABLES1Q8TDN4 633 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 FPGT-TNNI3KV9GXZ4 949 aa25.16■■□□□ 1.62
CCDC130-201ENST00000221554 A0A087WZG4 1122 aa25.15■■□□□ 1.62
CCDC130-201ENST00000221554 SLC27A2O14975 620 aa25.15■■□□□ 1.62
CCDC130-201ENST00000221554 F13A1P00488 732 aa25.15■■□□□ 1.62
CCDC130-201ENST00000221554 FAM227BQ96M60 508 aa25.15■■□□□ 1.62
CCDC130-201ENST00000221554 ARFGEF2Q9Y6D5 1785 aa25.14■■□□□ 1.62
CCDC130-201ENST00000221554 AFDNP55196 1824 aaKnown RBP25.14■■□□□ 1.62
CCDC130-201ENST00000221554 SYCE3A1L190 88 aa25.14■■□□□ 1.62
CCDC130-201ENST00000221554 PDLIM2Q96JY6 352 aa25.14■■□□□ 1.62
CCDC130-201ENST00000221554 WDR17Q8IZU2 1322 aa25.14■■□□□ 1.61
CCDC130-201ENST00000221554 ADCK5Q3MIX3 580 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 UBE3BQ7Z3V4 1068 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 ZCRB1Q8TBF4 217 aaKnown RBP25.13■■□□□ 1.61
CCDC130-201ENST00000221554 TLR7Q9NYK1 1049 aaKnown RBP25.13■■□□□ 1.61
CCDC130-201ENST00000221554 PDCP20941 246 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 UBE2HP62256 183 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 BLOC1S2Q6QNY1 142 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 ZSCAN30Q86W11 494 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 TSPY26PQ9H489 355 aa25.13■■□□□ 1.61
CCDC130-201ENST00000221554 H7C1W4 665 aa25.12■■□□□ 1.61
CCDC130-201ENST00000221554 CASP7P55210 303 aa25.12■■□□□ 1.61
CCDC130-201ENST00000221554 NKX1-1Q15270 411 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms