RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 FERMT3Q86UX7 667 aa17.55■□□□□ 0.4
CNOT3-201ENST00000221232 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
CNOT3-201ENST00000221232 TSPY26PQ9H489 355 aa17.55■□□□□ 0.4
CNOT3-201ENST00000221232 PHKG2P15735 406 aa17.54■□□□□ 0.4
CNOT3-201ENST00000221232 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
CNOT3-201ENST00000221232 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
CNOT3-201ENST00000221232 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
CNOT3-201ENST00000221232 DNM1Q05193 864 aaKnown RBP17.54■□□□□ 0.4
CNOT3-201ENST00000221232 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
CNOT3-201ENST00000221232 PLCB2Q00722 1185 aa17.54■□□□□ 0.4
CNOT3-201ENST00000221232 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
CNOT3-201ENST00000221232 ZNF589Q86UQ0 364 aaPredicted RBP17.54■□□□□ 0.4
CNOT3-201ENST00000221232 DNAJC2Q99543 621 aaKnown RBP17.54■□□□□ 0.4
CNOT3-201ENST00000221232 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
CNOT3-201ENST00000221232 NPHP4O75161 1426 aaPredicted RBP17.53■□□□□ 0.4
CNOT3-201ENST00000221232 ATF3P18847 181 aa17.53■□□□□ 0.4
CNOT3-201ENST00000221232 TPCN1Q9ULQ1 816 aa17.53■□□□□ 0.4
CNOT3-201ENST00000221232 CACNA1FO60840 1977 aa17.53■□□□□ 0.4
CNOT3-201ENST00000221232 TFCP2Q12800 502 aa17.53■□□□□ 0.4
CNOT3-201ENST00000221232 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
CNOT3-201ENST00000221232 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
CNOT3-201ENST00000221232 HEG1Q9ULI3 1381 aa17.52■□□□□ 0.4
CNOT3-201ENST00000221232 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
CNOT3-201ENST00000221232 SLC27A2O14975 620 aa17.52■□□□□ 0.39
CNOT3-201ENST00000221232 F13A1P00488 732 aa17.52■□□□□ 0.39
CNOT3-201ENST00000221232 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.39
CNOT3-201ENST00000221232 CCDC129Q6ZRS4 1044 aa17.52■□□□□ 0.39
CNOT3-201ENST00000221232 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.39
CNOT3-201ENST00000221232 CYP27B1O15528 508 aa17.51■□□□□ 0.39
CNOT3-201ENST00000221232 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
CNOT3-201ENST00000221232 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
CNOT3-201ENST00000221232 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-201ENST00000221232 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-201ENST00000221232 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
CNOT3-201ENST00000221232 MED1Q15648 1581 aaPredicted RBP17.51■□□□□ 0.39
CNOT3-201ENST00000221232 A0A087WZG4 1122 aa17.51■□□□□ 0.39
CNOT3-201ENST00000221232 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
CNOT3-201ENST00000221232 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
CNOT3-201ENST00000221232 SEC62Q99442 399 aaKnown RBP17.51■□□□□ 0.39
CNOT3-201ENST00000221232 CABP4P57796 275 aa17.5■□□□□ 0.39
CNOT3-201ENST00000221232 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
CNOT3-201ENST00000221232 MAP4K1Q92918 833 aa17.5■□□□□ 0.39
CNOT3-201ENST00000221232 TUBGCP6Q96RT7 1819 aa17.5■□□□□ 0.39
CNOT3-201ENST00000221232 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
CNOT3-201ENST00000221232 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
CNOT3-201ENST00000221232 ZNF830Q96NB3 372 aaPredicted RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 MTMR6Q9Y217 621 aa17.49■□□□□ 0.39
CNOT3-201ENST00000221232 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 LARP1BQ659C4 914 aaKnown RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 DDX46Q7L014 1031 aaKnown RBP17.49■□□□□ 0.39
CNOT3-201ENST00000221232 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
CNOT3-201ENST00000221232 DBNDD2Q9BQY9 259 aa17.49■□□□□ 0.39
CNOT3-201ENST00000221232 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
CNOT3-201ENST00000221232 PDLIM2Q96JY6 352 aa17.48■□□□□ 0.39
CNOT3-201ENST00000221232 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
CNOT3-201ENST00000221232 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
CNOT3-201ENST00000221232 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
CNOT3-201ENST00000221232 BLOC1S2Q6QNY1 142 aa17.48■□□□□ 0.39
CNOT3-201ENST00000221232 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
CNOT3-201ENST00000221232 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
CNOT3-201ENST00000221232 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
CNOT3-201ENST00000221232 USP25Q9UHP3 1055 aa17.47■□□□□ 0.39
CNOT3-201ENST00000221232 UTYO14607 1347 aa17.47■□□□□ 0.39
CNOT3-201ENST00000221232 FOSBP53539 338 aa17.47■□□□□ 0.39
CNOT3-201ENST00000221232 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
CNOT3-201ENST00000221232 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
CNOT3-201ENST00000221232 R3HCC1Q9Y3T6 440 aaKnown RBP17.46■□□□□ 0.39
CNOT3-201ENST00000221232 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
CNOT3-201ENST00000221232 TNNI3KQ59H18 835 aa17.46■□□□□ 0.39
CNOT3-201ENST00000221232 CDC37L1Q7L3B6 337 aa17.46■□□□□ 0.39
CNOT3-201ENST00000221232 FPGT-TNNI3KV9GXZ4 949 aa17.46■□□□□ 0.39
CNOT3-201ENST00000221232 TCHHQ07283 1943 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 A1BGP04217 495 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 TIMM10P62072 90 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 UBE2HP62256 183 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
CNOT3-201ENST00000221232 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
CNOT3-201ENST00000221232 NOL7Q9UMY1 257 aaKnown RBP17.45■□□□□ 0.38
CNOT3-201ENST00000221232 PHF14O94880 888 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 CAMK4Q16566 473 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 MEGF6O75095 1541 aa17.45■□□□□ 0.38
CNOT3-201ENST00000221232 HIP1O00291 1037 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 PSMA5P28066 241 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
CNOT3-201ENST00000221232 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 SH2B1Q9NRF2 756 aaPredicted RBP17.44■□□□□ 0.38
CNOT3-201ENST00000221232 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
CNOT3-201ENST00000221232 TAF5LO75529 589 aa17.43■□□□□ 0.38
CNOT3-201ENST00000221232 RFX5P48382 616 aaPredicted RBP17.43■□□□□ 0.38
CNOT3-201ENST00000221232 LRP10Q7Z4F1 713 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms