RNA–Protein interactions for RNA: ENST00000220772.7

SFRP1-201, Transcript of secreted frizzled related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFRP1, Length 4,492 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP1-201ENST00000220772 NMIQ13287 307 aaPredicted RBP19.21■□□□□ 0.67
SFRP1-201ENST00000220772 LMBR1LQ6UX01 489 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 CAVIN2O95810 425 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 MAP3K12Q12852 859 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
SFRP1-201ENST00000220772 RAB11FIP4Q86YS3 637 aa19.2■□□□□ 0.66
SFRP1-201ENST00000220772 TCEAL9Q9UHQ7 104 aa19.2■□□□□ 0.66
SFRP1-201ENST00000220772 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
SFRP1-201ENST00000220772 STX1AQ16623 288 aa19.2■□□□□ 0.66
SFRP1-201ENST00000220772 TTC12Q9H892 705 aaPredicted RBP19.2■□□□□ 0.66
SFRP1-201ENST00000220772 CCDC196A0A1B0GTZ2 297 aa19.2■□□□□ 0.66
SFRP1-201ENST00000220772 FAM200AQ8TCP9 573 aa19.2■□□□□ 0.66
SFRP1-201ENST00000220772 IFIT3O14879 490 aaKnown RBP19.19■□□□□ 0.66
SFRP1-201ENST00000220772 CBX1P83916 185 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 SYT1P21579 422 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 SLC12A7Q9Y666 1083 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 ATP10AO60312 1499 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 CPA1P15085 419 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 KLHL10Q6JEL2 608 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 CEP131Q9UPN4 1083 aa19.19■□□□□ 0.66
SFRP1-201ENST00000220772 ANKRD18BA2A2Z9 1011 aa19.18■□□□□ 0.66
SFRP1-201ENST00000220772 NEMFO60524 1076 aa19.18■□□□□ 0.66
SFRP1-201ENST00000220772 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
SFRP1-201ENST00000220772 NOLC1Q14978 699 aaKnown RBP eCLIP19.18■□□□□ 0.66
SFRP1-201ENST00000220772 GOLGA8AA7E2F4 631 aa19.18■□□□□ 0.66
SFRP1-201ENST00000220772 HOXC9P31274 260 aa19.18■□□□□ 0.66
SFRP1-201ENST00000220772 DYNC1I1O14576 645 aa19.18■□□□□ 0.66
SFRP1-201ENST00000220772 TOP1P11387 765 aaKnown RBP19.17■□□□□ 0.66
SFRP1-201ENST00000220772 MCMDC2Q4G0Z9 681 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 CREB3L3Q68CJ9 461 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 ANO6Q4KMQ2 910 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 HSP90AB3PQ58FF7 597 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 MICU3Q86XE3 530 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 PNMA6EA0A0J9YXQ4 647 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 IARSP41252 1262 aaKnown RBP19.17■□□□□ 0.66
SFRP1-201ENST00000220772 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 Q6ZUG5 572 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 CCDC186Q7Z3E2 898 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 RBSNQ9H1K0 784 aa19.17■□□□□ 0.66
SFRP1-201ENST00000220772 ARHGAP29Q52LW3 1261 aa19.16■□□□□ 0.66
SFRP1-201ENST00000220772 PRIMPOLQ96LW4 560 aa19.16■□□□□ 0.66
SFRP1-201ENST00000220772 CCDC43Q96MW1 224 aaKnown RBP19.16■□□□□ 0.66
SFRP1-201ENST00000220772 ERVK-7P63135 1459 aa19.16■□□□□ 0.66
SFRP1-201ENST00000220772 URI1O94763 535 aaPredicted RBP19.16■□□□□ 0.66
SFRP1-201ENST00000220772 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
SFRP1-201ENST00000220772 CFAP65Q6ZU64 1925 aaKnown RBP19.16■□□□□ 0.66
SFRP1-201ENST00000220772 NCOA7Q8NI08 942 aa19.16■□□□□ 0.66
SFRP1-201ENST00000220772 EPB41L2O43491 1005 aaKnown RBP19.15■□□□□ 0.66
SFRP1-201ENST00000220772 ATP2B2Q01814 1243 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 ABCC4O15439 1325 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 CTDP1Q9Y5B0 961 aaPredicted RBP19.15■□□□□ 0.66
SFRP1-201ENST00000220772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
SFRP1-201ENST00000220772 KLF18A0A0U1RQI7 1052 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 GSDMDP57764 484 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 ISM2Q6H9L7 571 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 TMC6Q7Z403 805 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 ZSCAN12O43309 604 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 CCDC144CPQ8IYA2 1237 aa19.15■□□□□ 0.66
SFRP1-201ENST00000220772 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.66
SFRP1-201ENST00000220772 ZMYM3Q14202 1370 aa19.14■□□□□ 0.66
SFRP1-201ENST00000220772 SETQ01105 290 aaPredicted RBP19.14■□□□□ 0.66
SFRP1-201ENST00000220772 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.66
SFRP1-201ENST00000220772 PLEKHF1Q96S99 279 aa19.14■□□□□ 0.66
SFRP1-201ENST00000220772 PLA2R1Q13018 1463 aa19.14■□□□□ 0.65
SFRP1-201ENST00000220772 KCNA6P17658 529 aa19.14■□□□□ 0.65
SFRP1-201ENST00000220772 KRT18P05783 430 aaKnown RBP19.14■□□□□ 0.65
SFRP1-201ENST00000220772 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
SFRP1-201ENST00000220772 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
SFRP1-201ENST00000220772 ERLIN1O75477 346 aa19.14■□□□□ 0.65
SFRP1-201ENST00000220772 SLC5A1P13866 664 aa19.14■□□□□ 0.65
SFRP1-201ENST00000220772 GSPT1P15170 499 aaKnown RBP19.14■□□□□ 0.65
SFRP1-201ENST00000220772 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
SFRP1-201ENST00000220772 RANBP6O60518 1105 aaKnown RBP19.13■□□□□ 0.65
SFRP1-201ENST00000220772 GCP02774 474 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 SSRP1Q08945 709 aaKnown RBP19.13■□□□□ 0.65
SFRP1-201ENST00000220772 TMEM67Q5HYA8 995 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 DEF6Q9H4E7 631 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 CWC15Q9P013 229 aaKnown RBP19.13■□□□□ 0.65
SFRP1-201ENST00000220772 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 CCDC171Q6TFL3 1326 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 IP6K1Q92551 441 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
SFRP1-201ENST00000220772 IL15P40933 162 aaPredicted RBP19.12■□□□□ 0.65
SFRP1-201ENST00000220772 METAP2P50579 478 aaKnown RBP eCLIP19.12■□□□□ 0.65
SFRP1-201ENST00000220772 TYRO3Q06418 890 aa19.12■□□□□ 0.65
SFRP1-201ENST00000220772 TMCO3Q6UWJ1 677 aa19.12■□□□□ 0.65
SFRP1-201ENST00000220772 RUFY3Q7L099 469 aa19.12■□□□□ 0.65
SFRP1-201ENST00000220772 RNF41Q9H4P4 317 aaPredicted RBP19.12■□□□□ 0.65
SFRP1-201ENST00000220772 SGSM2O43147 1006 aa19.12■□□□□ 0.65
SFRP1-201ENST00000220772 IQCA1Q86XH1 822 aa19.12■□□□□ 0.65
SFRP1-201ENST00000220772 DDX21Q9NR30 783 aaKnown RBP eCLIP19.12■□□□□ 0.65
SFRP1-201ENST00000220772 CTCFLQ8NI51 663 aaPredicted RBP19.12■□□□□ 0.65
SFRP1-201ENST00000220772 ABCA8O94911 1581 aa19.11■□□□□ 0.65
SFRP1-201ENST00000220772 TTF1Q15361 905 aaPredicted RBP19.11■□□□□ 0.65
SFRP1-201ENST00000220772 AXDND1Q5T1B0 1012 aaPredicted RBP19.11■□□□□ 0.65
SFRP1-201ENST00000220772 USP19O94966 1318 aa19.11■□□□□ 0.65
SFRP1-201ENST00000220772 ZFYP08048 801 aaPredicted RBP19.11■□□□□ 0.65
SFRP1-201ENST00000220772 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms