RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 PLBD2Q8NHP8 589 aa36.37■■■■□ 3.41
PDCD2-201ENST00000167218 UTP14AQ9BVJ6 771 aaKnown RBP36.37■■■■□ 3.41
PDCD2-201ENST00000167218 LTBP3Q9NS15 1303 aa36.36■■■■□ 3.41
PDCD2-201ENST00000167218 ANKRD13DQ6ZTN6 518 aa36.36■■■■□ 3.41
PDCD2-201ENST00000167218 TSR2Q969E8 191 aaKnown RBP36.36■■■■□ 3.41
PDCD2-201ENST00000167218 DICER1Q9UPY3 1922 aaKnown RBP36.36■■■■□ 3.41
PDCD2-201ENST00000167218 ZC3H4Q9UPT8 1303 aaKnown RBP36.35■■■■□ 3.41
PDCD2-201ENST00000167218 SLC10A5Q5PT55 438 aa36.35■■■■□ 3.41
PDCD2-201ENST00000167218 SOGA3Q5TF21 947 aa36.35■■■■□ 3.41
PDCD2-201ENST00000167218 TSPYL6Q8N831 410 aa36.35■■■■□ 3.41
PDCD2-201ENST00000167218 IL16Q14005 1332 aa36.34■■■■□ 3.41
PDCD2-201ENST00000167218 ALDH1B1P30837 517 aa36.34■■■■□ 3.41
PDCD2-201ENST00000167218 C3orf67Q6ZVT6 689 aa36.34■■■■□ 3.41
PDCD2-201ENST00000167218 NMRK2Q9NPI5 230 aa36.34■■■■□ 3.41
PDCD2-201ENST00000167218 HOXA10P31260 410 aaPredicted RBP36.33■■■■□ 3.41
PDCD2-201ENST00000167218 TAOK3Q9H2K8 898 aa36.32■■■■□ 3.4
PDCD2-201ENST00000167218 RNF123Q5XPI4 1314 aa36.32■■■■□ 3.4
PDCD2-201ENST00000167218 TIAM2Q8IVF5 1701 aa36.31■■■■□ 3.4
PDCD2-201ENST00000167218 OLFM4Q6UX06 510 aa36.31■■■■□ 3.4
PDCD2-201ENST00000167218 PHAXQ9H814 394 aaKnown RBP36.31■■■■□ 3.4
PDCD2-201ENST00000167218 CCDC93Q567U6 631 aa36.3■■■■□ 3.4
PDCD2-201ENST00000167218 ISCA1Q9BUE6 129 aa36.3■■■■□ 3.4
PDCD2-201ENST00000167218 FAM9BQ8IZU0 186 aa36.29■■■■□ 3.4
PDCD2-201ENST00000167218 SYNE4Q8N205 404 aa36.29■■■■□ 3.4
PDCD2-201ENST00000167218 SALL2Q9Y467 1007 aaPredicted RBP36.28■■■■□ 3.4
PDCD2-201ENST00000167218 KDM2BQ8NHM5 1336 aa36.28■■■■□ 3.4
PDCD2-201ENST00000167218 RPGRQ92834 1020 aaKnown RBP36.27■■■■□ 3.4
PDCD2-201ENST00000167218 NLRP3Q96P20 1036 aa36.27■■■■□ 3.4
PDCD2-201ENST00000167218 SNED1Q8TER0 1413 aa36.26■■■■□ 3.4
PDCD2-201ENST00000167218 LAMB2P55268 1798 aa36.26■■■■□ 3.4
PDCD2-201ENST00000167218 CCDC30Q5VVM6 783 aa36.26■■■■□ 3.4
PDCD2-201ENST00000167218 WDR63Q8IWG1 891 aa36.26■■■■□ 3.4
PDCD2-201ENST00000167218 CRAMP1Q96RY5 1269 aa36.26■■■■□ 3.4
PDCD2-201ENST00000167218 TRMT112Q9UI30 125 aaKnown RBP36.26■■■■□ 3.4
PDCD2-201ENST00000167218 GLTPD2A6NH11 291 aa36.24■■■■□ 3.39
PDCD2-201ENST00000167218 RBM17Q96I25 401 aaKnown RBP36.24■■■■□ 3.39
PDCD2-201ENST00000167218 CHMP4AQ9BY43 222 aa36.24■■■■□ 3.39
PDCD2-201ENST00000167218 ATP5J2-PTCD1G3V325 749 aa36.23■■■■□ 3.39
PDCD2-201ENST00000167218 TRIM28Q13263 835 aaKnown RBP36.23■■■■□ 3.39
PDCD2-201ENST00000167218 SH3TC1Q8TE82 1336 aa36.23■■■■□ 3.39
PDCD2-201ENST00000167218 HCLS1P14317 486 aaPredicted RBP36.22■■■■□ 3.39
PDCD2-201ENST00000167218 FKBP4Q02790 459 aaKnown RBP eCLIP36.22■■■■□ 3.39
PDCD2-201ENST00000167218 RTKN2Q8IZC4 609 aa36.22■■■■□ 3.39
PDCD2-201ENST00000167218 ZNF428Q96B54 188 aa36.22■■■■□ 3.39
PDCD2-201ENST00000167218 GOLGA2Q08379 1002 aa36.21■■■■□ 3.39
PDCD2-201ENST00000167218 TWISTNBQ3B726 338 aaPredicted RBP36.21■■■■□ 3.39
PDCD2-201ENST00000167218 RIC3Q7Z5B4 369 aa36.21■■■■□ 3.39
PDCD2-201ENST00000167218 RRAGCQ9HB90 399 aa36.21■■■■□ 3.39
PDCD2-201ENST00000167218 FANCIQ9NVI1 1328 aa36.2■■■■□ 3.39
PDCD2-201ENST00000167218 TOMM70O94826 608 aa36.19■■■■□ 3.38
PDCD2-201ENST00000167218 DDX60Q8IY21 1712 aaKnown RBP36.19■■■■□ 3.38
PDCD2-201ENST00000167218 SLC51AQ86UW1 340 aa36.18■■■■□ 3.38
PDCD2-201ENST00000167218 CC2D2BQ6DHV5 1058 aa36.17■■■■□ 3.38
PDCD2-201ENST00000167218 SPINK5Q9NQ38 1064 aaPredicted RBP36.17■■■■□ 3.38
PDCD2-201ENST00000167218 FAM89AQ96GI7 184 aa36.16■■■■□ 3.38
PDCD2-201ENST00000167218 ZNF277Q9NRM2 450 aaPredicted RBP36.16■■■■□ 3.38
PDCD2-201ENST00000167218 ABCC4O15439 1325 aa36.15■■■■□ 3.38
PDCD2-201ENST00000167218 TCERG1O14776 1098 aaKnown RBP36.15■■■■□ 3.38
PDCD2-201ENST00000167218 PPEF1O14829 653 aaPredicted RBP36.15■■■■□ 3.38
PDCD2-201ENST00000167218 PSMD1Q99460 953 aa36.15■■■■□ 3.38
PDCD2-201ENST00000167218 CEP350Q5VT06 3117 aa36.14■■■■□ 3.38
PDCD2-201ENST00000167218 MYD88Q99836 296 aa36.13■■■■□ 3.37
PDCD2-201ENST00000167218 TAF1P21675 1872 aa36.13■■■■□ 3.37
PDCD2-201ENST00000167218 WDR90Q96KV7 1748 aa36.12■■■■□ 3.37
PDCD2-201ENST00000167218 POTECB2RU33 542 aa36.12■■■■□ 3.37
PDCD2-201ENST00000167218 DPY19L2Q6NUT2 758 aa36.12■■■■□ 3.37
PDCD2-201ENST00000167218 METTL22Q9BUU2 404 aaPredicted RBP36.12■■■■□ 3.37
PDCD2-201ENST00000167218 STK31Q9BXU1 1019 aa36.12■■■■□ 3.37
PDCD2-201ENST00000167218 DDX58O95786 925 aaKnown RBP36.11■■■■□ 3.37
PDCD2-201ENST00000167218 CACNA1FO60840 1977 aa36.1■■■■□ 3.37
PDCD2-201ENST00000167218 VAMP4O75379 141 aa36.1■■■■□ 3.37
PDCD2-201ENST00000167218 IARSP41252 1262 aaKnown RBP36.1■■■■□ 3.37
PDCD2-201ENST00000167218 GRIPAP1Q4V328 841 aa36.1■■■■□ 3.37
PDCD2-201ENST00000167218 G2E3Q7L622 706 aa36.1■■■■□ 3.37
PDCD2-201ENST00000167218 RBM46Q8TBY0 533 aaKnown RBP36.1■■■■□ 3.37
PDCD2-201ENST00000167218 ATP6V0A2Q9Y487 856 aa36.1■■■■□ 3.37
PDCD2-201ENST00000167218 VEGFAP15692 232 aaPredicted RBP36.09■■■■□ 3.37
PDCD2-201ENST00000167218 EXOSC9Q06265 439 aaKnown RBP36.09■■■■□ 3.37
PDCD2-201ENST00000167218 KSR2Q6VAB6 950 aa36.09■■■■□ 3.37
PDCD2-201ENST00000167218 ZNF521Q96K83 1311 aa36.08■■■■□ 3.37
PDCD2-201ENST00000167218 BBOX1O75936 387 aa36.08■■■■□ 3.37
PDCD2-201ENST00000167218 SLC4A2P04920 1241 aa36.08■■■■□ 3.37
PDCD2-201ENST00000167218 HSPA6P17066 643 aa36.08■■■■□ 3.37
PDCD2-201ENST00000167218 SF3B3Q15393 1217 aaKnown RBP36.08■■■■□ 3.37
PDCD2-201ENST00000167218 RTL5Q5HYW3 569 aaPredicted RBP36.08■■■■□ 3.37
PDCD2-201ENST00000167218 ZBTB38Q8NAP3 1195 aaPredicted RBP36.08■■■■□ 3.37
PDCD2-201ENST00000167218 CCDC191Q8NCU4 936 aa36.08■■■■□ 3.37
PDCD2-201ENST00000167218 MAP3K2Q9Y2U5 619 aa36.08■■■■□ 3.37
PDCD2-201ENST00000167218 PI4KAP2A4QPH2 592 aa36.07■■■■□ 3.36
PDCD2-201ENST00000167218 DDX46Q7L014 1031 aaKnown RBP36.07■■■■□ 3.36
PDCD2-201ENST00000167218 C16orf71Q8IYS4 520 aaPredicted RBP36.07■■■■□ 3.36
PDCD2-201ENST00000167218 PI4KAP1Q8N8J0 262 aa36.07■■■■□ 3.36
PDCD2-201ENST00000167218 IRS4O14654 1257 aaPredicted RBP36.06■■■■□ 3.36
PDCD2-201ENST00000167218 DDNO94850 711 aaPredicted RBP36.06■■■■□ 3.36
PDCD2-201ENST00000167218 GRAPQ13588 217 aa36.05■■■■□ 3.36
PDCD2-201ENST00000167218 GRAPLQ8TC17 118 aaPredicted RBP36.05■■■■□ 3.36
PDCD2-201ENST00000167218 COL4A5P29400 1685 aa36.04■■■■□ 3.36
PDCD2-201ENST00000167218 SP8Q8IXZ3 490 aa36.03■■■■□ 3.36
PDCD2-201ENST00000167218 CWC25Q9NXE8 425 aaPredicted RBP36.03■■■■□ 3.36
PDCD2-201ENST00000167218 FZD9O00144 591 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms