RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DZIP3Q86Y13 1208 aaKnown RBP24.29■■□□□ 1.48
TNFRSF1A-201ENST00000162749 OSBPL3Q9H4L5 887 aa24.29■■□□□ 1.48
TNFRSF1A-201ENST00000162749 PDE1AP54750 535 aa24.28■■□□□ 1.48
TNFRSF1A-201ENST00000162749 RTL5Q5HYW3 569 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF1A-201ENST00000162749 TBC1D2BQ9UPU7 963 aa24.27■■□□□ 1.48
TNFRSF1A-201ENST00000162749 TAF1LQ8IZX4 1826 aa24.26■■□□□ 1.47
TNFRSF1A-201ENST00000162749 ERVV-1B6SEH8 477 aa24.26■■□□□ 1.47
TNFRSF1A-201ENST00000162749 DDRGK1Q96HY6 314 aa24.26■■□□□ 1.47
TNFRSF1A-201ENST00000162749 OS9Q13438 667 aaPredicted RBP24.26■■□□□ 1.47
TNFRSF1A-201ENST00000162749 MYH3P11055 1940 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 MX1P20591 662 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 NBR1Q14596 966 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 HSP90AB3PQ58FF7 597 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 FOXO4P98177 505 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 LINC00116Q8NCU8 138 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 KLHDC4Q8TBB5 520 aa24.25■■□□□ 1.47
TNFRSF1A-201ENST00000162749 KCNQ4P56696 695 aa24.24■■□□□ 1.47
TNFRSF1A-201ENST00000162749 RFX5P48382 616 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1A-201ENST00000162749 BCORQ6W2J9 1755 aa24.23■■□□□ 1.47
TNFRSF1A-201ENST00000162749 GPTP24298 496 aa24.23■■□□□ 1.47
TNFRSF1A-201ENST00000162749 TSHZ3Q63HK5 1081 aa24.23■■□□□ 1.47
TNFRSF1A-201ENST00000162749 LMBR1LQ6UX01 489 aa24.23■■□□□ 1.47
TNFRSF1A-201ENST00000162749 ERC1Q8IUD2 1116 aa24.23■■□□□ 1.47
TNFRSF1A-201ENST00000162749 NLRP10Q86W26 655 aa24.22■■□□□ 1.47
TNFRSF1A-201ENST00000162749 COPRSQ9NQ92 184 aa24.22■■□□□ 1.47
TNFRSF1A-201ENST00000162749 STAP2Q9UGK3 403 aa24.22■■□□□ 1.47
TNFRSF1A-201ENST00000162749 AK9Q5TCS8 1911 aa24.21■■□□□ 1.47
TNFRSF1A-201ENST00000162749 PCCAP05165 728 aaPredicted RBP24.21■■□□□ 1.47
TNFRSF1A-201ENST00000162749 PTPN12Q05209 780 aaKnown RBP24.21■■□□□ 1.47
TNFRSF1A-201ENST00000162749 NUTM1Q86Y26 1132 aa24.21■■□□□ 1.47
TNFRSF1A-201ENST00000162749 SIL1Q9H173 461 aa24.21■■□□□ 1.47
TNFRSF1A-201ENST00000162749 SASH1O94885 1247 aa24.2■■□□□ 1.47
TNFRSF1A-201ENST00000162749 G3BP1Q13283 466 aaKnown RBP eCLIP24.2■■□□□ 1.47
TNFRSF1A-201ENST00000162749 ZBTB38Q8NAP3 1195 aaPredicted RBP24.2■■□□□ 1.47
TNFRSF1A-201ENST00000162749 FAM89AQ96GI7 184 aa24.2■■□□□ 1.47
TNFRSF1A-201ENST00000162749 SDSP20132 328 aa24.2■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
TNFRSF1A-201ENST00000162749 TBC1D9Q6ZT07 1266 aa24.19■■□□□ 1.46
TNFRSF1A-201ENST00000162749 UBN2Q6ZU65 1347 aa24.19■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CDC45O75419 566 aa24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 ZNF34Q8IZ26 560 aa24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CLASRPQ8N2M8 674 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 UPF2Q9HAU5 1272 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CHMP3Q9Y3E7 222 aa24.18■■□□□ 1.46
TNFRSF1A-201ENST00000162749 AOX1Q06278 1338 aa24.17■■□□□ 1.46
TNFRSF1A-201ENST00000162749 ZNF772Q68DY9 489 aaPredicted RBP24.17■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CCNL1Q9UK58 526 aaPredicted RBP24.17■■□□□ 1.46
TNFRSF1A-201ENST00000162749 MFAP1P55081 439 aaKnown RBP24.16■■□□□ 1.46
TNFRSF1A-201ENST00000162749 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
TNFRSF1A-201ENST00000162749 PLA2G12BQ9BX93 195 aa24.16■■□□□ 1.46
TNFRSF1A-201ENST00000162749 BCL11BQ9C0K0 894 aaPredicted RBP24.16■■□□□ 1.46
TNFRSF1A-201ENST00000162749 CDHR2Q9BYE9 1310 aa24.16■■□□□ 1.46
TNFRSF1A-201ENST00000162749 SYNE4Q8N205 404 aa24.16■■□□□ 1.46
TNFRSF1A-201ENST00000162749 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
TNFRSF1A-201ENST00000162749 TBC1D32Q96NH3 1257 aa24.15■■□□□ 1.46
TNFRSF1A-201ENST00000162749 SCN7AQ01118 1682 aa24.14■■□□□ 1.46
TNFRSF1A-201ENST00000162749 RBM6P78332 1123 aaKnown RBP24.14■■□□□ 1.46
TNFRSF1A-201ENST00000162749 PI4K2BQ8TCG2 481 aa24.14■■□□□ 1.46
TNFRSF1A-201ENST00000162749 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
TNFRSF1A-201ENST00000162749 FAM196AQ6ZSG2 479 aa24.14■■□□□ 1.45
TNFRSF1A-201ENST00000162749 TRMT112Q9UI30 125 aaKnown RBP24.14■■□□□ 1.45
TNFRSF1A-201ENST00000162749 USP42Q9H9J4 1324 aaKnown RBP24.14■■□□□ 1.45
TNFRSF1A-201ENST00000162749 C4BP0C0L5 1744 aa24.13■■□□□ 1.45
TNFRSF1A-201ENST00000162749 EAF2Q96CJ1 260 aaPredicted RBP24.12■■□□□ 1.45
TNFRSF1A-201ENST00000162749 AACSQ86V21 672 aa24.12■■□□□ 1.45
TNFRSF1A-201ENST00000162749 TTC41PQ6P2S7 1318 aa24.11■■□□□ 1.45
TNFRSF1A-201ENST00000162749 CSF1RP07333 972 aa24.11■■□□□ 1.45
TNFRSF1A-201ENST00000162749 IFIT2P09913 472 aaKnown RBP24.11■■□□□ 1.45
TNFRSF1A-201ENST00000162749 DDX60Q8IY21 1712 aaKnown RBP24.1■■□□□ 1.45
TNFRSF1A-201ENST00000162749 IRS4O14654 1257 aaPredicted RBP24.1■■□□□ 1.45
TNFRSF1A-201ENST00000162749 RPS6KA4O75676 772 aa24.1■■□□□ 1.45
TNFRSF1A-201ENST00000162749 C4AP0C0L4 1744 aa24.1■■□□□ 1.45
TNFRSF1A-201ENST00000162749 LAMB2P55268 1798 aa24.09■■□□□ 1.45
TNFRSF1A-201ENST00000162749 SUSD4Q5VX71 490 aa24.09■■□□□ 1.45
TNFRSF1A-201ENST00000162749 CLEC4GQ6UXB4 293 aa24.09■■□□□ 1.45
TNFRSF1A-201ENST00000162749 ATG9AQ7Z3C6 839 aa24.09■■□□□ 1.45
TNFRSF1A-201ENST00000162749 ZNF652Q9Y2D9 606 aa24.09■■□□□ 1.45
TNFRSF1A-201ENST00000162749 GNPATO15228 680 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 TFCP2Q12800 502 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 CCDC57Q2TAC2 916 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 PARP10Q53GL7 1025 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 SMIM5Q71RC9 77 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 ZNF594Q96JF6 807 aaPredicted RBP24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 C22orf23Q9BZE7 217 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 NIP7Q9Y221 180 aaKnown RBP eCLIP24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 TRIM6-TRIM34B2RNG4 842 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 CCDC85AQ96PX6 553 aaPredicted RBP24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 ECHDC1Q9NTX5 307 aa24.08■■□□□ 1.45
TNFRSF1A-201ENST00000162749 CTSWP56202 376 aa24.07■■□□□ 1.44
TNFRSF1A-201ENST00000162749 TTLL11Q8NHH1 800 aa24.07■■□□□ 1.44
TNFRSF1A-201ENST00000162749 CCDC8Q9H0W5 538 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF1A-201ENST00000162749 TLR7Q9NYK1 1049 aaKnown RBP24.07■■□□□ 1.44
TNFRSF1A-201ENST00000162749 TRIM37O94972 964 aa24.07■■□□□ 1.44
TNFRSF1A-201ENST00000162749 LRRC4BQ9NT99 713 aa24.07■■□□□ 1.44
TNFRSF1A-201ENST00000162749 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 EYA2O00167 538 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 GLRX3O76003 335 aaKnown RBP24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 AMIGO3Q86WK7 504 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms