RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SETDB2Q96T68 719 aa5□□□□□ -1.61
CFTR-201ENST00000003084 HDAC9Q9UKV0 1011 aa5□□□□□ -1.61
CFTR-201ENST00000003084 SBNO1A3KN83 1393 aa5□□□□□ -1.61
CFTR-201ENST00000003084 MLH3Q9UHC1 1453 aa5□□□□□ -1.61
CFTR-201ENST00000003084 CCDC196A0A1B0GTZ2 297 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 MYO1BO43795 1136 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 RBM26Q5T8P6 1007 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 UTP14AQ9BVJ6 771 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 MBIPQ9NS73 344 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 PARP3Q9Y6F1 533 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 WDR33Q9C0J8 1336 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 NLRP1Q9C000 1473 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 SAMD9LQ8IVG5 1584 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 STIM1Q13586 685 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 FILIP1LQ4L180 1135 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 NUP133Q8WUM0 1156 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 EVI5LQ96CN4 794 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 PHAXQ9H814 394 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 PLEKHG1Q9ULL1 1385 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 SHROOM2Q13796 1616 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 PREX2Q70Z35 1606 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 KINO60870 393 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 MAP4K4O95819 1239 aaPredicted RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 CLCN6P51797 869 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 TXLNBQ8N3L3 684 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 SSH1Q8WYL5 1049 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 SLC24A3Q9HC58 644 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 CCP110O43303 1012 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 HOXC9P31274 260 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 ZNF76P36508 570 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 COPS2P61201 443 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 EIF4A2Q14240 407 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 FOXD4L6Q3SYB3 417 aaPredicted RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 FOXD4L3Q6VB84 417 aaPredicted RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 MPHOSPH6Q99547 160 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 MKNK2Q9HBH9 465 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 EFCAB6Q5THR3 1501 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 RDXP35241 583 aaKnown RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 ZNF444Q8N0Y2 327 aaPredicted RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 CUL5Q93034 780 aa4.99□□□□□ -1.61
CFTR-201ENST00000003084 BMP2KQ9NSY1 1161 aaPredicted RBP4.99□□□□□ -1.61
CFTR-201ENST00000003084 HLA-DOAP06340 250 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 NUDT7P0C024 238 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 FBXW10Q5XX13 1052 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ZNF804AQ7Z570 1209 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ANKRD18AQ8IVF6 992 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 SMARCE1Q969G3 411 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 RBM17Q96I25 401 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 THUMPD2Q9BTF0 503 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 METRNQ9UJH8 293 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 RTCBQ9Y3I0 505 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 K7ELQ4 463 aaPredicted RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 CWC27Q6UX04 472 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 ZNF622Q969S3 477 aaKnown RBP eCLIP4.98□□□□□ -1.61
CFTR-201ENST00000003084 SDF4Q9BRK5 362 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ANKRD2Q9GZV1 360 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 NAPBQ9H115 298 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ABCF2Q9UG63 623 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 LRRFIP2Q9Y608 721 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 GCP02774 474 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 TRIM21P19474 475 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 HSPA2P54652 639 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 RIPOR1Q6ZS17 1223 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 IFNL1Q8IU54 200 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ZBTB3Q9H5J0 574 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ARAP3Q8WWN8 1544 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 NPHP4O75161 1426 aaPredicted RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 GPS2Q13227 327 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 ODF2Q5BJF6 829 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 CT47A1Q5JQC4 288 aaPredicted RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 JAKMIP1Q96N16 626 aaKnown RBP4.98□□□□□ -1.61
CFTR-201ENST00000003084 OCEL1Q9H607 264 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 STK32BQ9NY57 414 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 CFAP45Q9UL16 551 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 KDM5CP41229 1560 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 A0A1W2PP64 1363 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 NPC1L1Q9UHC9 1359 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 TRAF1Q13077 416 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 PNMA5Q96PV4 448 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 EYA3Q99504 573 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 IL1RAPL2Q9NP60 686 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 CABP5Q9NP86 173 aa4.98□□□□□ -1.61
CFTR-201ENST00000003084 PARD3Q8TEW0 1356 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 RNMTO43148 476 aaKnown RBP4.97□□□□□ -1.61
CFTR-201ENST00000003084 DIXDC1Q155Q3 683 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 KSR2Q6VAB6 950 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 CCDC12Q8WUD4 166 aaPredicted RBP4.97□□□□□ -1.61
CFTR-201ENST00000003084 NLRP3Q96P20 1036 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 CCDC85AQ96PX6 553 aaPredicted RBP4.97□□□□□ -1.61
CFTR-201ENST00000003084 SMAPO00193 183 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 PDE4BQ07343 736 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 SYCP1Q15431 976 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 SLFNL1Q499Z3 407 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 CRNKL1Q9BZJ0 848 aaKnown RBP4.97□□□□□ -1.61
CFTR-201ENST00000003084 SH2B1Q9NRF2 756 aaPredicted RBP4.97□□□□□ -1.61
CFTR-201ENST00000003084 MAGI3Q5TCQ9 1506 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 ZFYP08048 801 aaPredicted RBP4.97□□□□□ -1.61
CFTR-201ENST00000003084 GPTP24298 496 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 HSP90AB2PQ58FF8 381 aa4.97□□□□□ -1.61
CFTR-201ENST00000003084 SLC27A3Q5K4L6 730 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms