RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Mapk8ip3Q9ESN9 1337 aa10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Aknad1E9Q8N6 675 aa10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Zc3h15Q3TIV5 426 aaKnown RBP10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Tbc1d32Q3URV1 1296 aa10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Scaf8Q6DID3 1268 aa10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Atp2b4Q6Q477 1205 aa10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Foxp4Q9DBY0 795 aaKnown RBP10.61□□□□□ -0.71
Trim40-203ENSMUST00000172711 Ank1Q02357 1862 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 Pitpnm1O35954 1243 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 Map3k9Q3U1V8 1077 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 Rpgrip1lQ8CG73 1264 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 Ttc5Q99LG4 440 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 Trim34aQ99PP6 485 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 NinQ61043 2035 aa10.6□□□□□ -0.71
Trim40-203ENSMUST00000172711 Magea8O89012 320 aa10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 Ubxn2aQ99KJ0 258 aa10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 Foxo3Q9WVH4 672 aa10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 Aebp2Q9Z248 504 aaKnown RBP10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 Nrxn2E9Q7X7 1710 aa10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 Myh1Q5SX40 1942 aa10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 Erbb4Q61527 1308 aa10.59□□□□□ -0.71
Trim40-203ENSMUST00000172711 1700019A02RikA0A087WPV9 146 aa10.58□□□□□ -0.72
Trim40-203ENSMUST00000172711 Skor1Q8BX46 964 aa10.58□□□□□ -0.72
Trim40-203ENSMUST00000172711 Psd3Q2PFD7 1037 aa10.58□□□□□ -0.72
Trim40-203ENSMUST00000172711 Ly6iQ9WU67 134 aa10.58□□□□□ -0.72
Trim40-203ENSMUST00000172711 Arap2Q8BZ05 1703 aa10.57□□□□□ -0.72
Trim40-203ENSMUST00000172711 BcorQ8CGN4 1759 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Ecm29Q6PDI5 1840 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 AfdnQ9QZQ1 1820 aaKnown RBP10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Eva1cP58659 440 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Adamts19P59509 1210 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Igflr1Q3U4N7 345 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Ltb4r2Q9JJL9 360 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Gja10Q9WUS4 505 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Sh3tc1G3X9F6 1346 aa10.56□□□□□ -0.72
Trim40-203ENSMUST00000172711 Znf541Q0GGX2 1363 aa10.55□□□□□ -0.72
Trim40-203ENSMUST00000172711 Glg1Q61543 1175 aaKnown RBP10.55□□□□□ -0.72
Trim40-203ENSMUST00000172711 Ankib1Q6ZPS6 1085 aa10.55□□□□□ -0.72
Trim40-203ENSMUST00000172711 Rbm17Q8JZX4 405 aaKnown RBP10.55□□□□□ -0.72
Trim40-203ENSMUST00000172711 Tmem119Q8R138 280 aa10.55□□□□□ -0.72
Trim40-203ENSMUST00000172711 Pcdh15Q99PJ1 1943 aa10.55□□□□□ -0.72
Trim40-203ENSMUST00000172711 EvplQ9D952 2035 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Cavin4A2AMM0 362 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Glt1d1A4FUP9 346 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Fkbp1aP26883 108 aaKnown RBP10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Llgl2Q3TJ91 1027 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Rgl2Q61193 778 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 U2surpQ6NV83 1029 aaKnown RBP10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 WaslQ91YD9 501 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Myoz2Q9JJW5 264 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Scn11aQ9R053 1765 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 Ttc41Q692V3 1318 aa10.54□□□□□ -0.72
Trim40-203ENSMUST00000172711 NfixP70257 488 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Map9Q3TRR0 646 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Igf2bp3Q9CPN8 579 aaKnown RBP10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Swt1Q9DBQ9 907 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Tbc1d8Q9Z1A9 1134 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Disp3A3KFU9 1347 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Las1lA2BE28 776 aaKnown RBP10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Gm7347D3YYI9 267 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Speer4aF8VPX6 267 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Eif6O55135 245 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Tom1l2Q5SRX1 507 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Gnl3lQ6PGG6 577 aaKnown RBP10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Trim35Q8C006 501 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Angel2Q8K1C0 544 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Popdc2Q9ES82 367 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Lgr5Q9Z1P4 907 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Cyp2ab1S4R196 498 aa10.53□□□□□ -0.72
Trim40-203ENSMUST00000172711 Plekhh1Q80TI1 1356 aa10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Polr2aP08775 1970 aaKnown RBP10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Atp6v1aP50516 617 aaKnown RBP10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Zbtb38Q3LR78 1197 aa10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Fstl1Q62356 306 aa10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Ptrh1Q8BW00 204 aa10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Klf15Q9EPW2 415 aa10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Noa1Q9JJG9 693 aaKnown RBP10.52□□□□□ -0.73
Trim40-203ENSMUST00000172711 Zbtb40Q6PCS8 1258 aa10.51□□□□□ -0.73
Trim40-203ENSMUST00000172711 Glis3Q6XP49 780 aa10.51□□□□□ -0.73
Trim40-203ENSMUST00000172711 Plekhg6Q8R0J1 787 aa10.51□□□□□ -0.73
Trim40-203ENSMUST00000172711 Greb1lB9EJV3 1913 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Eddm13E9Q7F5 164 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Cyp19a1P28649 503 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 CanxP35564 591 aaKnown RBP10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 GmpsQ3THK7 693 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Q3TQI7 289 aaKnown RBP10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Ankle2Q6P1H6 964 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Ccdc93Q7TQK5 629 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Foxo4Q9WVH3 505 aa10.5□□□□□ -0.73
Trim40-203ENSMUST00000172711 Hsp90ab1P11499 724 aaKnown RBP10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Pou3f3P31361 497 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Psmd1Q3TXS7 953 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 PsapQ61207 557 aaKnown RBP10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Zbtb7bQ64321 544 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 HlfQ8BW74 295 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 GptQ8QZR5 496 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Golga2Q921M4 999 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Gdf11Q9Z1W4 405 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Atf7ipQ7TT18 1306 aa10.49□□□□□ -0.73
Trim40-203ENSMUST00000172711 Esx1O88933 382 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms