RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 WaplQ65Z40 1200 aaKnown RBP17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Myom3A2ABU4 1439 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ranbp1P34022 203 aaKnown RBP17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Wdr70Q3TWF6 657 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 U2af1l4Q8BGJ9 220 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Rnf41Q8BH75 317 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 SfpqQ8VIJ6 699 aaKnown RBP17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Cep19Q9CQA8 163 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Pik3ap1Q9EQ32 811 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gm7347D3YYI9 267 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Map3k2Q61083 619 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ddx19aQ61655 478 aaKnown RBP17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Myl3P09542 204 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gbp1Q01514 589 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Tsnaxip1Q99P25 704 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Krt20Q9D312 431 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Speer4f2E9Q366 295 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Cfap73J3QPZ5 306 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Myd88P22366 296 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Slf2Q6P9P0 1278 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Nop9Q8BMC4 636 aaKnown RBP17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ces1aE9PYP1 563 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Eftud2O08810 971 aaKnown RBP17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gucy1a3Q9ERL9 691 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Lztfl1Q9JHQ5 299 aa17.24■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ampd3O08739 766 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Rbm26Q6NZN0 1012 aaKnown RBP17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gramd4Q8CB44 633 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Fchsd2Q3USJ8 740 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Eme2Q56A04 373 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ifit1bl2Q3U687 466 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 RbsnQ80Y56 783 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ankrd1Q9CR42 319 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Pkd2l2Q9JLG4 621 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Epb41l3Q9WV92 929 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ncf1Q09014 390 aa17.23■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ube2hP62257 183 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ranbp6Q8BIV3 1105 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Fam204aQ8C6C7 236 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Terf2O35144 541 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Lmod1Q8BVA4 595 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Krt23Q99PS0 422 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Tldc2A2ACG1 198 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Cbfa2t2O70374 594 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Terf1P70371 421 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ncoa2Q61026 1462 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Serpinc1P32261 465 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Hip1rQ9JKY5 1068 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 1700122O11RikJ3QPW6 241 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Kifc2O08672 792 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Tsr2Q8C8T8 191 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ankrd49Q8VE42 238 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Fam76aQ922G2 307 aa17.22■□□□□ 0.35
Chd3-201ENSMUST00000092971 Syt1P46096 421 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Exoc1Q8R3S6 894 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 BlvraQ9CY64 295 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ppp1r9bQ6R891 817 aaKnown RBP17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Cplx4Q80WM3 160 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 NinlQ6ZQ12 1394 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ktn1Q61595 1327 aaKnown RBP17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Stat1P42225 749 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Plcb3P51432 1234 aaKnown RBP17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Sestd1Q80UK0 696 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Zmynd15Q8C0R7 736 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Smc5Q8CG46 1101 aaKnown RBP17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Elp1Q7TT37 1333 aaKnown RBP17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 ZfxP17012 799 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 CalcaP70160 136 aa17.21■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gm3409A0A0G2JE67 319 aa17.21■□□□□ 0.34
Chd3-201ENSMUST00000092971 Ccdc170D3YXL0 722 aa17.21■□□□□ 0.34
Chd3-201ENSMUST00000092971 VimP20152 466 aaKnown RBP17.21■□□□□ 0.34
Chd3-201ENSMUST00000092971 Armc9Q9D2I5 817 aa17.21■□□□□ 0.34
Chd3-201ENSMUST00000092971 Arhgap5P97393 1501 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Q3UPC7 1272 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Asic1Q6NXK8 526 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Chd1lQ9CXF7 900 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 PrxO55103 1391 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Zfp213E9QAW0 468 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Calm1P0DP26 149 aaKnown RBP17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Calm2P0DP27 149 aaKnown RBP17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Calm3P0DP28 149 aaKnown RBP17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Ift88Q61371 824 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Plekhg2Q6KAU7 1340 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Atp2b3Q0VF55 1220 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Chpf2Q3UU43 768 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Kiaa1211Q5PR69 1207 aa17.2■□□□□ 0.34
Chd3-201ENSMUST00000092971 Fam186bD3Z420 943 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Brd1E9PZ26 1189 aaKnown RBP17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Irf9Q61179 399 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Gm28510A0A087WP28 240 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 1700018F24RikB2RW27 314 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Ano8Q6PB70 1060 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Ano10Q8BH79 659 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 ParvgQ9ERD8 331 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Haus2Q9CQS9 234 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Spg7Q3ULF4 781 aa17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Phldb1Q6PDH0 1371 aaKnown RBP17.19■□□□□ 0.34
Chd3-201ENSMUST00000092971 Slc1a4O35874 532 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Ssx2ipQ8VC66 615 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Rasal2E9PW37 1286 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms