RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Wdr3Q8BHB4 942 aaKnown RBP10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Dzip1Q8BMD2 852 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Adgrg2Q8CJ12 1009 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ttc30a1Q99J38 664 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ttc30bQ9CY00 664 aa10.92□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cyp2c69E9PXC3 491 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 1700011I03RikE9PYL8 271 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Zbtb4Q5F293 982 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Trpc1Q61056 793 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Trim37Q6PCX9 961 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cdhr1Q8VHP6 859 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Pdxdc1Q99K01 787 aaKnown RBP10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 MycbpQ9EQS3 103 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cfap74Q3UY96 1578 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Rnf19aP50636 840 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 SfswapQ3USH5 945 aaKnown RBP10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ankrd53Q3V0J4 497 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Pih1d1Q9CQJ2 290 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Ap3b2Q9JME5 1082 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Epb41l3Q9WV92 929 aa10.91□□□□□ -0.66
Upf3b-201ENSMUST00000076265 RereQ80TZ9 1558 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Kif28pD3YXS5 1028 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 MafbP54841 323 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 SargQ8BI29 606 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Il20Q9JKV9 176 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Tagln3Q9R1Q8 199 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 Cyp2ab1S4R196 498 aa10.9□□□□□ -0.66
Upf3b-201ENSMUST00000076265 ClspnQ80YR7 1315 aa10.9□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Fam124aD3Z5V4 536 aa10.9□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Capn3Q64691 821 aa10.9□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Trerf1Q8BXJ2 1205 aa10.9□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Zmym4A2A791 1549 aaKnown RBP10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Fyb2A2A995 729 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Nap1l1P28656 391 aaKnown RBP10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 EgflamQ4VBE4 1017 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Dpp8Q80YA7 892 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ushbp1Q8R370 680 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Neurl4Q5NCX5 1563 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Nedd1P33215 660 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ppp2r5bQ6PD28 497 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Map10Q8BJS7 891 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Sfr1Q8BP27 319 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Cog1Q9Z160 980 aa10.89□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Tbc1d8bA3KGB4 1114 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 OatP29758 439 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Pik3caP42337 1068 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Lzts1P60853 599 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Pfkfb2P70265 519 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Pacs2Q3V3Q7 862 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ctdp1Q7TSG2 960 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Gpatch3Q8BIY1 525 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Suds3Q8BR65 328 aa10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Rpl17Q9CPR4 184 aaKnown RBP10.88□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Prdm11A2AGX3 565 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ccdc148Q6P5U8 527 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Rell1Q8K2J7 272 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Unc45aQ99KD5 944 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Tsc1Q9EP53 1161 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Cd53Q61451 219 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Armcx6Q8K3A6 301 aa10.87□□□□□ -0.67
Upf3b-201ENSMUST00000076265 PtprmP28828 1452 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Duxf3A0A0N4SV92 674 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Pabpc1lA2A5N3 607 aaKnown RBP10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Tnnt1O88346 262 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 CgnP59242 1191 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Mum1l1Q4VA55 681 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Mylk4Q5SUV5 386 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Enpp3Q6DYE8 874 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 PicalmQ7M6Y3 660 aaKnown RBP10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ipo5Q8BKC5 1097 aaKnown RBP10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Samd14Q8K070 417 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Emilin2Q8K482 1074 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Cdc42bpbQ7TT50 1713 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Cd151O35566 253 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Stip1Q60864 543 aaKnown RBP10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 TxlnaQ6PAM1 554 aaKnown RBP10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Camk2gQ923T9 529 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Rassf3Q99P51 232 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Xpo4Q9ESJ0 1151 aa10.86□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Dthd1E9PZX1 795 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Vamp4O70480 141 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Myl1P05977 188 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Mx1P09922 631 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 ClgnP52194 611 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Fam170aQ66LM6 333 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Camsap2Q8C1B1 1461 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ddb1Q3U1J4 1140 aaKnown RBP10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Nlrp9bQ66X22 1003 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Tpcn2Q8BWC0 731 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Q922M7 232 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Map3k5O35099 1380 aa10.85□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Gm29133A0A1B0GT72 266 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Gm12666A2AMD0 254 aaKnown RBP10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Speer2E9Q9U2 264 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Gml2G5E8L7 176 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Hsd3b2P26149 373 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Cntn3Q07409 1028 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Prr7Q3V0I2 269 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Fbxo41Q6NS60 873 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Slc5a1Q8C3K6 665 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms