RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Soga3Q6NZL0 945 aa26.48■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Clca2Q8BG22 942 aa26.48■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Col5a2Q3U962 1497 aa26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 CanxP35564 591 aaKnown RBP26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Aifm3Q3TY86 605 aa26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Eif4g2Q62448 906 aaKnown RBP26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Cyp7a1Q64505 503 aa26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 MarsQ68FL6 902 aaKnown RBP26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Rbm17Q8JZX4 405 aaKnown RBP26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Fam213aQ9CYH2 218 aa26.47■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Akap2O54931 893 aa26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Dok7Q18PE0 504 aa26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Ripor2Q80U16 1078 aa26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Mphosph10Q810V0 681 aaKnown RBP26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Ttc5Q99LG4 440 aa26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Ttc14Q9CSP9 761 aa26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 Gja10Q9WUS4 505 aa26.46■■□□□ 1.83
Ssbp4-201ENSMUST00000049908 NmiO35309 314 aa26.45■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Pik3ap1Q9EQ32 811 aa26.45■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Rwdd1Q9CQK7 243 aa26.44■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Gm7347D3YYI9 267 aa26.43■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Speer4aF8VPX6 267 aa26.43■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Yy1Q00899 414 aa26.43■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Psd3Q2PFD7 1037 aa26.43■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Sf3b3Q921M3 1217 aaKnown RBP26.43■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Greb1lB9EJV3 1913 aa26.43■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Thrap3Q569Z6 951 aaKnown RBP26.42■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Bend3Q6PAL0 825 aa26.42■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Gjd4Q8BSD4 364 aa26.42■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Ttc19Q8CC21 365 aa26.42■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Lmbr1lQ9D1E5 489 aa26.42■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Ptf1aQ9QX98 324 aa26.42■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Dpf2Q61103 391 aaKnown RBP26.41■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 WaslQ91YD9 501 aa26.41■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Apbb1Q9QXJ1 710 aa26.41■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Q3UPC7 1272 aa26.4■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Znf609Q8BZ47 1413 aa26.4■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Nup188Q6ZQH8 1759 aa26.4■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Zap70P43404 618 aa26.39■■□□□ 1.82
Ssbp4-201ENSMUST00000049908 Mybbp1aQ7TPV4 1344 aaKnown RBP26.38■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Zbtb38Q3LR78 1197 aa26.38■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Ric3Q8BPM6 367 aa26.38■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Cyp2ab1S4R196 498 aa26.38■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Flt1P35969 1333 aa26.37■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Cfdp1O88271 295 aaKnown RBP26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Plcb3P51432 1234 aaKnown RBP26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 BcanQ61361 883 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Glg1Q61543 1175 aaKnown RBP26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Golgb1E9PVZ8 3238 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Map3k13Q1HKZ5 959 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 EappQ5BU09 281 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Pcsk7Q61139 770 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Insm1Q63ZV0 521 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Sde2Q8K1J5 448 aaKnown RBP26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Aldh1l1Q8R0Y6 902 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 UvssaQ9D479 717 aa26.36■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Trim34bJ3QNR8 485 aa26.35■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 CfhP06909 1234 aa26.35■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Csf1rP09581 977 aa26.33■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Adarb2Q9JI20 745 aa26.33■■□□□ 1.81
Ssbp4-201ENSMUST00000049908 Btaf1E9QAE3 1848 aa26.32■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Map3k9Q3U1V8 1077 aa26.32■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Oas2E9Q9A9 742 aa26.31■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Grm8P47743 908 aa26.31■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Znf330Q922H9 316 aa26.31■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Dydc2Q9D3X8 139 aa26.31■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Myo3bQ1EG27 1305 aa26.31■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 4931408C20RikE9PWP9 1381 aa26.31■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 XpcP51612 930 aa26.3■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Trim58Q5NCC9 485 aa26.3■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Kif2cQ922S8 721 aa26.3■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Rps8P62242 208 aaKnown RBP26.29■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Fam122aQ9DB52 284 aa26.29■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Gnat3Q3V3I2 354 aa26.27■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Vil1Q62468 827 aa26.27■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Nutm1Q8BHP2 1126 aa26.27■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Ppp1r3fQ9JIG4 799 aa26.27■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 Lgr5Q9Z1P4 907 aa26.27■■□□□ 1.8
Ssbp4-201ENSMUST00000049908 NpcdF8VQB8 469 aa26.26■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 NexnQ7TPW1 607 aa26.26■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Smc4Q8CG47 1286 aa26.26■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Pank1Q8K4K6 548 aa26.26■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Rtn4Q99P72 1162 aaKnown RBP26.26■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Eif3aP23116 1344 aaKnown RBP26.26■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 NfixP70257 488 aa26.25■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Gpr101Q80T62 511 aa26.25■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Stk32bQ9JJX8 414 aa26.25■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Map3k15A2AQW0 1331 aa26.25■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Nol10Q5RJG1 687 aaKnown RBP26.24■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Naa16Q9DBB4 864 aa26.24■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Chrna5Q2MKA5 467 aa26.23■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Itga6Q61739 1091 aa26.23■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Maco1Q7TQE6 664 aaKnown RBP26.23■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 EvplQ9D952 2035 aa26.23■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Zc3h15Q3TIV5 426 aaKnown RBP26.23■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 VeztQ3ZK22 780 aa26.23■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Ltn1Q6A009 1767 aa26.22■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Heg1E9Q7X6 1337 aa26.22■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Vsig10D3YX43 558 aa26.22■■□□□ 1.79
Ssbp4-201ENSMUST00000049908 Znf428Q8C1M2 176 aa26.22■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms