RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 NexnQ7TPW1 607 aa28.07■■■□□ 2.08
Upf3a-201ENSMUST00000043767 HmcesQ8R1M0 353 aaKnown RBP28.07■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Hsp90ab1P11499 724 aaKnown RBP28.07■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Dhx38Q80X98 1228 aa28.07■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Dpf1Q9QX66 387 aa28.07■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Ankrd31A0A140LI88 1765 aa28.07■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Tmem87bQ8BKU8 555 aa28.06■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Smc4Q8CG47 1286 aa28.06■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Eif2s2Q99L45 331 aaKnown RBP28.06■■■□□ 2.08
Upf3a-201ENSMUST00000043767 RtcbQ99LF4 505 aaKnown RBP28.06■■■□□ 2.08
Upf3a-201ENSMUST00000043767 LratQ9JI60 231 aa28.06■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Foxo4Q9WVH3 505 aa28.06■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Q8C5K5 320 aa28.04■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Rtn4Q99P72 1162 aaKnown RBP28.04■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Tktl2Q9D4D4 627 aa28.03■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Prl3d2F6R3P9 224 aa28.03■■■□□ 2.08
Upf3a-201ENSMUST00000043767 AppP12023 770 aa28.03■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Plcb3P51432 1234 aaKnown RBP28.03■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Cct4P80315 539 aaKnown RBP28.03■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Cyp7a1Q64505 503 aa28.02■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Mapk8ip1Q9WVI9 707 aa28.02■■■□□ 2.08
Upf3a-201ENSMUST00000043767 Ptpdc1Q6NZK8 747 aa28.01■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Prl3d3A0A0M6L0J6 224 aa28.01■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Myh1Q5SX40 1942 aa28■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Greb1lB9EJV3 1913 aa28■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Zc3h12cQ5DTV4 884 aa27.99■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Zbtb38Q3LR78 1197 aa27.99■■■□□ 2.07
Upf3a-201ENSMUST00000043767 4930504O13RikQ8C5Z9 145 aa27.99■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Dis3l2Q8CI75 870 aaKnown RBP27.99■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Tpx2A2APB8 745 aaKnown RBP27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Stox1B2RQL2 990 aa27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Sult6b1P0CC03 303 aa27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Tlr8P58682 1032 aa27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Nol10Q5RJG1 687 aaKnown RBP27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Chmp3Q9CQ10 224 aa27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Nek4Q9Z1J2 792 aa27.98■■■□□ 2.07
Upf3a-201ENSMUST00000043767 AtrnQ9WU60 1428 aa27.97■■■□□ 2.07
Upf3a-201ENSMUST00000043767 CltaO08585 235 aa27.97■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Rtkn2Q14B46 604 aa27.97■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Hmox1P14901 289 aa27.96■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Atg9aQ68FE2 551 aa27.96■■■□□ 2.07
Upf3a-201ENSMUST00000043767 CalcaP70160 136 aa27.96■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Npy5rO70342 466 aa27.95■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Htatsf1Q8BGC0 757 aa27.95■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Amhr2Q8K592 568 aa27.95■■■□□ 2.07
Upf3a-201ENSMUST00000043767 Tbc1d9Q3UYK3 1264 aa27.94■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Rrs1Q9CYH6 365 aaKnown RBP27.94■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Neurod6P48986 337 aa27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Zbtb45Q52KG4 520 aa27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Plch1Q4KWH5 1682 aa27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Zkscan2G3X952 960 aa27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Fam198bQ3UPI1 517 aa27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Ncoa5Q91W39 579 aaKnown RBP27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Casz1Q9CWL2 1761 aa27.93■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Trim34bJ3QNR8 485 aa27.92■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Gimap8Q75N62 688 aa27.92■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Sumf1Q8R0F3 372 aa27.92■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Mybbp1aQ7TPV4 1344 aaKnown RBP27.92■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Ubr3Q5U430 1889 aa27.92■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Fam228bQ497Q6 232 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Slc26a8Q8R0C3 999 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Pde4bB1AWC9 736 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Eya2O08575 532 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Anxa1P10107 346 aaKnown RBP27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 CenppQ9CZ92 286 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Akt1s1Q9D1F4 257 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Ubn2Q80WC1 1314 aa27.91■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Col22a1E9Q7P1 1613 aa27.9■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Mfap1aC0HKD8 439 aaKnown RBP27.9■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Mfap1bC0HKD9 439 aaKnown RBP27.9■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Tmc2Q8R4P4 888 aa27.9■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Itga6Q61739 1091 aa27.9■■■□□ 2.06
Upf3a-201ENSMUST00000043767 RestQ8VIG1 1082 aa27.9■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Adamtsl1Q8BLI0 1745 aa27.89■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Zfyve9A2A8R0 1397 aa27.89■■■□□ 2.06
Upf3a-201ENSMUST00000043767 MeiocA2AG06 965 aa27.89■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Ppp4r3aQ6P2K6 820 aa27.89■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Sf3a1Q8K4Z5 791 aaKnown RBP27.89■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Dbndd1Q9CZ00 160 aa27.89■■■□□ 2.06
Upf3a-201ENSMUST00000043767 Gpr182P43142 395 aa27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Prune1Q8BIW1 454 aa27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Bag3Q9JLV1 577 aaKnown RBP27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Sptbn5F6UCX4 1208 aa27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Slurp2P0DP59 97 aa27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Q9D2X8 372 aa27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Col11a2Q64739 1736 aa27.88■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Nlrp1aQ2LKU9 1182 aa27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Taf5lQ91WQ5 589 aa27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 4931408C20RikE9PWP9 1381 aa27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Tbc1d32Q3URV1 1296 aa27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Rbm27Q5SFM8 1060 aaKnown RBP27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 DbnlQ62418 436 aa27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Duox1A2AQ92 1551 aa27.87■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Pdia3P27773 505 aaKnown RBP27.86■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Rgs17Q9QZB0 210 aa27.86■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Foxo3Q9WVH4 672 aa27.86■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Ftl2P49945 183 aa27.85■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Timm10P62073 90 aa27.85■■■□□ 2.05
Upf3a-201ENSMUST00000043767 CpzQ8R4V4 654 aa27.85■■■□□ 2.05
Upf3a-201ENSMUST00000043767 Ciao1Q99KN2 339 aa27.85■■■□□ 2.05
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms