RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Prune1Q8BIW1 454 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Ehd4Q9EQP2 541 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Ssc5dQ8BV57 1371 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Zkscan2G3X952 960 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Susd4Q8BH32 490 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 AbraQ8BUZ1 375 aa10.67□□□□□ -0.7
Trim39-201ENSMUST00000042717 Ppp6r1Q7TSI3 856 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Tmem87bQ8BKU8 555 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Dis3l2Q8CI75 870 aaKnown RBP10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Abcc4E9Q236 1325 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Zc3h12cQ5DTV4 884 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Ank1Q02357 1862 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Pde4bB1AWC9 736 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Lrrc43Q3V0L5 667 aa10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 Ncoa5Q91W39 579 aaKnown RBP10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 RtcbQ99LF4 505 aaKnown RBP10.66□□□□□ -0.7
Trim39-201ENSMUST00000042717 CltaO08585 235 aa10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 Sult6b1P0CC03 303 aa10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 Tlr8P58682 1032 aa10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 RestQ8VIG1 1082 aa10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 Stox1B2RQL2 990 aa10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 HmcesQ8R1M0 353 aaKnown RBP10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 Chrna2Q91X60 512 aa10.65□□□□□ -0.7
Trim39-201ENSMUST00000042717 Prl3d3A0A0M6L0J6 224 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Trim34bJ3QNR8 485 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Timm10P62073 90 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Pim2Q62070 370 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Brf1Q8CFK2 676 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Bag3Q9JLV1 577 aaKnown RBP10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Pdia3P27773 505 aaKnown RBP10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Fam84aQ9D650 292 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Il1rapl2Q9ERS6 686 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Kiaa0232Q80U59 1396 aaKnown RBP10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Prl3d2F6R3P9 224 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Nol8Q3UHX0 1147 aaKnown RBP10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 EspnlQ3UYR4 1005 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 EappQ5BU09 281 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Rab3gap1Q80UJ7 981 aa10.64□□□□□ -0.71
Trim39-201ENSMUST00000042717 Snapc4Q8BP86 1333 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Snai1Q02085 264 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Msl1Q6PDM1 616 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Dbndd1Q9CZ00 160 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 CenppQ9CZ92 286 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Slurp2P0DP59 97 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Zbtb38Q3LR78 1197 aa10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Sf3a1Q8K4Z5 791 aaKnown RBP10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Tfip11Q9ERA6 838 aaKnown RBP10.63□□□□□ -0.71
Trim39-201ENSMUST00000042717 Eva1cP58659 440 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Itga6Q61739 1091 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Foxo4Q9WVH3 505 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Eya2O08575 532 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Tbc1d32Q3URV1 1296 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Fam228bQ497Q6 232 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ipo9Q91YE6 1041 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Akt1s1Q9D1F4 257 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Popdc2Q9ES82 367 aa10.62□□□□□ -0.71
Trim39-201ENSMUST00000042717 Stk11ipQ3TAA7 1072 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Vars2Q3U2A8 1060 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 DbnlQ62418 436 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Erc2Q6PH08 957 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Abca3Q8R420 1704 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Gpr182P43142 395 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Atg9aQ68FE2 551 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Gimap8Q75N62 688 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Kndc1Q0KK55 1742 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Mrc1Q61830 1456 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Fkbp1aP26883 108 aaKnown RBP10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Taf5lQ91WQ5 589 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ppp6r3Q922D4 844 aa10.61□□□□□ -0.71
Trim39-201ENSMUST00000042717 Plcb3P51432 1234 aaKnown RBP10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Vps54Q5SPW0 977 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ppm1gQ61074 542 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ltv1Q6NSQ7 470 aaKnown RBP10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Unc5clQ6R653 518 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 CoblQ5NBX1 1337 aaKnown RBP10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ftl2P49945 183 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Zkscan8Q8BSL0 588 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 SowahdQ8BY98 327 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Dnai1Q8C0M8 701 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Sumf1Q8R0F3 372 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Tmc2Q8R4P4 888 aa10.6□□□□□ -0.71
Trim39-201ENSMUST00000042717 Prr29B1ARI9 187 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Nucb1Q02819 459 aaKnown RBP10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ppp4r3aQ6P2K6 820 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Amhr2Q8K592 568 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Rbm5Q91YE7 815 aaKnown RBP10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Foxo3Q9WVH4 672 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Bin2D3Z6Q9 489 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Ppip5k2Q6ZQB6 1129 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Tnpo1Q8BFY9 898 aaKnown RBP10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Kif2cQ922S8 721 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 CpvlQ9D3S9 478 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Sh3bp5Q9Z131 463 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Sipa1l3G3X9J0 1776 aa10.59□□□□□ -0.71
Trim39-201ENSMUST00000042717 Gsdma2Q32M21 443 aa10.58□□□□□ -0.72
Trim39-201ENSMUST00000042717 Ddx46Q569Z5 1032 aaKnown RBP10.58□□□□□ -0.72
Trim39-201ENSMUST00000042717 Tshz3Q8CGV9 1081 aa10.58□□□□□ -0.72
Trim39-201ENSMUST00000042717 Anapc15-psA0A140T8L6 141 aa10.58□□□□□ -0.72
Trim39-201ENSMUST00000042717 Rabep1O35551 862 aa10.58□□□□□ -0.72
Trim39-201ENSMUST00000042717 Nlrp1aQ2LKU9 1182 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 204.7 ms