RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 Cplx4Q80WM3 160 aa15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Spats2Q8K1N4 545 aaKnown RBP15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 WrnO09053 1401 aa15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Gm21671G3UY31 267 aa15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Clec11aO88200 328 aa15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Prpf38aQ4FK66 312 aaKnown RBP15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Q8BZJ8 459 aa15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 SncbQ91ZZ3 133 aa15.81■□□□□ 0.12
Ddx42-201ENSMUST00000021046 AknaQ80VW7 1404 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Ankrd40Q5SUE8 363 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 CtcfQ61164 736 aaKnown RBP15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Tti2Q8BGV4 512 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Ano1Q8BHY3 960 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Mei4Q8BRM6 389 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Klc4Q9DBS5 619 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Dnajc25A2ALW5 357 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Polr3dQ91WD1 398 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Ubn2Q80WC1 1314 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Q32P12 615 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Agtpbp1Q641K1 1218 aa15.8■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Vamp4O70480 141 aa15.79■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Cep89Q9CZX2 791 aa15.79■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Surf1P09925 306 aa15.79■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Ccdc33Q3ULW6 985 aa15.79■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Panx2Q6IMP4 677 aa15.79■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Tnip1Q9WUU8 647 aa15.79■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Atg4a-psA0A0G2JFS9 396 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 AW822073A0A0N4SUK1 652 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Ppfia4B8QI36 1187 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Ap1g2O88512 791 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Snd1Q78PY7 910 aaKnown RBP15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Klhl30Q8C3F7 581 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Atg4aQ8C9S8 396 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Erlin1Q91X78 346 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 EmbP21995 330 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Fsd1Q7TPM6 496 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Vil1Q62468 827 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Fam53cQ8BXQ8 393 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Arl8aQ8VEH3 186 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 HypkQ9CR41 129 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Cpsf1Q9EPU4 1441 aaKnown RBP15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Pde4cQ3UEI1 686 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Rassf6Q80UQ2 353 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Trim6Q8BGE7 488 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 GzmnQ920S1 248 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Klhdc4Q921I2 584 aa15.78■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Eif4g1Q6NZJ6 1600 aaKnown RBP15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Pafah1b1P63005 410 aaKnown RBP15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 TxlnaQ6PAM1 554 aaKnown RBP15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Atp1a3Q6PIC6 1013 aa15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Mtmr3Q8K296 1196 aa15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Adcy3Q8VHH7 1145 aa15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 Desi2Q9D291 194 aa15.77■□□□□ 0.12
Ddx42-201ENSMUST00000021046 H2afxP27661 143 aaKnown RBP15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Ccdc148Q6P5U8 527 aa15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Gigyf1Q99MR1 1044 aaKnown RBP15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Abcd1P48410 736 aa15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Mybpc2Q5XKE0 1136 aa15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Kif3bQ61771 747 aa15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Npdc1Q64322 332 aa15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 SyncQ9EPM5 470 aa15.77■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Kiaa1107Q80TK0 1369 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Kansl3A2RSY1 903 aaKnown RBP15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Dnajc21E9Q8D0 531 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Myo1bP46735 1107 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Ggnbp2Q5SV77 696 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Ankrd1Q9CR42 319 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Sall3Q62255 1320 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Cct2P80314 535 aaKnown RBP15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Leo1Q5XJE5 667 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Plcd1Q8R3B1 756 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Bmp2kQ91Z96 1138 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Irgm2A0A140LIF8 407 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 RargP18911 458 aaKnown RBP15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Kif2bQ8C0N1 668 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Tango6Q8C3S2 1079 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Ankrd50F7BE84 1390 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Peg3Q3URU2 1571 aa15.76■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Elmsan1E9Q2I4 1089 aaKnown RBP15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Top1Q04750 767 aaKnown RBP15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Arhgap31A6X8Z5 1425 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Map2k1P31938 393 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Rnf40Q3U319 1001 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Tlcd1Q99JT6 247 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Sh3gl3Q62421 347 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Gigyf2Q6Y7W8 1291 aaKnown RBP15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Rufy3Q9D394 469 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Abca5Q8K448 1642 aa15.75■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Stim1P70302 685 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Specc1lQ2KN98 1118 aaKnown RBP15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Gnl3lQ6PGG6 577 aaKnown RBP15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Cdca8Q8BHX3 289 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Ccdc152E9PX14 254 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Tex19.1Q99MV2 351 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Bcl11bQ99PV8 884 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Dennd4bQ3U1Y4 1499 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Nsd3Q6P2L6 1439 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Atp8b3Q6UQ17 1335 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Rgs22G3UYX5 1258 aa15.74■□□□□ 0.11
Ddx42-201ENSMUST00000021046 Scp2P32020 547 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms