RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Chrna5Q2MKA5 467 aa21.85■■□□□ 1.09
Trim54-201ENSMUST00000013771 Micall1Q8BGT6 870 aa21.85■■□□□ 1.09
Trim54-201ENSMUST00000013771 Plagl1Q9JLQ4 704 aa21.85■■□□□ 1.09
Trim54-201ENSMUST00000013771 Zscan21Q07231 555 aa21.84■■□□□ 1.09
Trim54-201ENSMUST00000013771 Cdc37l1Q9CZP7 335 aa21.84■■□□□ 1.09
Trim54-201ENSMUST00000013771 Gja10Q9WUS4 505 aa21.84■■□□□ 1.09
Trim54-201ENSMUST00000013771 Thsd7bQ6P4U0 1607 aa21.84■■□□□ 1.09
Trim54-201ENSMUST00000013771 Pcsk7Q61139 770 aa21.83■■□□□ 1.09
Trim54-201ENSMUST00000013771 Ltb4r2Q9JJL9 360 aa21.83■■□□□ 1.09
Trim54-201ENSMUST00000013771 BcorQ8CGN4 1759 aa21.83■■□□□ 1.08
Trim54-201ENSMUST00000013771 VegfbP49766 207 aa21.82■■□□□ 1.08
Trim54-201ENSMUST00000013771 Uspl1Q3ULM6 1089 aa21.82■■□□□ 1.08
Trim54-201ENSMUST00000013771 Pappa2E9PZ87 1789 aa21.81■■□□□ 1.08
Trim54-201ENSMUST00000013771 Map9Q3TRR0 646 aa21.8■■□□□ 1.08
Trim54-201ENSMUST00000013771 Tom1l2Q5SRX1 507 aa21.8■■□□□ 1.08
Trim54-201ENSMUST00000013771 Myoz2Q9JJW5 264 aa21.8■■□□□ 1.08
Trim54-201ENSMUST00000013771 Atp6v1aP50516 617 aaKnown RBP21.79■■□□□ 1.08
Trim54-201ENSMUST00000013771 Igflr1Q3U4N7 345 aa21.79■■□□□ 1.08
Trim54-201ENSMUST00000013771 Nlgn2Q69ZK9 836 aa21.79■■□□□ 1.08
Trim54-201ENSMUST00000013771 Arap2Q8BZ05 1703 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 Magea8O89012 320 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 Myd88P22366 296 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 Irf9Q61179 399 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 GptQ8QZR5 496 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 UvssaQ9D479 717 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 Dpp7Q9ET22 506 aa21.78■■□□□ 1.08
Trim54-201ENSMUST00000013771 Ltn1Q6A009 1767 aa21.77■■□□□ 1.08
Trim54-201ENSMUST00000013771 Myh1Q5SX40 1942 aa21.77■■□□□ 1.08
Trim54-201ENSMUST00000013771 Eddm13E9Q7F5 164 aa21.77■■□□□ 1.08
Trim54-201ENSMUST00000013771 CanxP35564 591 aaKnown RBP21.77■■□□□ 1.08
Trim54-201ENSMUST00000013771 WasP70315 520 aa21.77■■□□□ 1.08
Trim54-201ENSMUST00000013771 Foxo4Q9WVH3 505 aa21.77■■□□□ 1.08
Trim54-201ENSMUST00000013771 Cnksr1A2A9K7 700 aa21.76■■□□□ 1.07
Trim54-201ENSMUST00000013771 Tbc1d32Q3URV1 1296 aa21.76■■□□□ 1.07
Trim54-201ENSMUST00000013771 EappQ5BU09 281 aa21.76■■□□□ 1.07
Trim54-201ENSMUST00000013771 Cyp7a1Q64505 503 aa21.76■■□□□ 1.07
Trim54-201ENSMUST00000013771 Sde2Q8K1J5 448 aaKnown RBP21.76■■□□□ 1.07
Trim54-201ENSMUST00000013771 Ank1Q02357 1862 aa21.76■■□□□ 1.07
Trim54-201ENSMUST00000013771 Vsig10D3YX43 558 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 AK157302I3ITR1 129 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 Cyp19a1P28649 503 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 Ccdc93Q7TQK5 629 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 AbraQ8BUZ1 375 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 Bicc1Q99MQ1 977 aaKnown RBP21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 Atxn3Q9CVD2 355 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 Isca1Q9D924 129 aa21.75■■□□□ 1.07
Trim54-201ENSMUST00000013771 Cops6O88545 324 aa21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Psmd1Q3TXS7 953 aa21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Eif4g2Q62448 906 aaKnown RBP21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Tnnt3Q9QZ47 272 aa21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Ly6iQ9WU67 134 aa21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Kank1E9Q238 1360 aa21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Znf609Q8BZ47 1413 aa21.74■■□□□ 1.07
Trim54-201ENSMUST00000013771 Oas2E9Q9A9 742 aa21.73■■□□□ 1.07
Trim54-201ENSMUST00000013771 Sf3b3Q921M3 1217 aaKnown RBP21.73■■□□□ 1.07
Trim54-201ENSMUST00000013771 Dydc2Q9D3X8 139 aa21.73■■□□□ 1.07
Trim54-201ENSMUST00000013771 Adarb2Q9JI20 745 aa21.73■■□□□ 1.07
Trim54-201ENSMUST00000013771 MypnQ5DTJ9 1315 aa21.73■■□□□ 1.07
Trim54-201ENSMUST00000013771 NfixP70257 488 aa21.72■■□□□ 1.07
Trim54-201ENSMUST00000013771 Llgl2Q3TJ91 1027 aa21.72■■□□□ 1.07
Trim54-201ENSMUST00000013771 Fkbp5Q64378 456 aa21.72■■□□□ 1.07
Trim54-201ENSMUST00000013771 Tnip1Q9WUU8 647 aa21.72■■□□□ 1.07
Trim54-201ENSMUST00000013771 CoilQ5SU73 570 aa21.72■■□□□ 1.07
Trim54-201ENSMUST00000013771 Usp34Q6ZQ93 3582 aa21.71■■□□□ 1.07
Trim54-201ENSMUST00000013771 Plekhg6Q8R0J1 787 aa21.71■■□□□ 1.07
Trim54-201ENSMUST00000013771 Gdf11Q9Z1W4 405 aa21.71■■□□□ 1.07
Trim54-201ENSMUST00000013771 Znf219Q6IQX8 726 aa21.7■■□□□ 1.06
Trim54-201ENSMUST00000013771 Ddx58Q6Q899 926 aa21.7■■□□□ 1.06
Trim54-201ENSMUST00000013771 Ttc14Q9CSP9 761 aa21.7■■□□□ 1.06
Trim54-201ENSMUST00000013771 NynrinQ5DTZ0 1840 aa21.7■■□□□ 1.06
Trim54-201ENSMUST00000013771 NinQ61043 2035 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 BcanQ61361 883 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Skor1Q8BX46 964 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Ncbp3Q8BZR9 615 aaKnown RBP21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Angel2Q8K1C0 544 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Slc51aQ8R000 340 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Cwc25Q9DBF7 416 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Klf15Q9EPW2 415 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Col1a1P11087 1453 aa21.69■■□□□ 1.06
Trim54-201ENSMUST00000013771 Nrxn2E9Q7X7 1710 aa21.68■■□□□ 1.06
Trim54-201ENSMUST00000013771 Rbm25B2RY56 838 aaKnown RBP21.68■■□□□ 1.06
Trim54-201ENSMUST00000013771 Scaf8Q6DID3 1268 aa21.68■■□□□ 1.06
Trim54-201ENSMUST00000013771 Glis3Q6XP49 780 aa21.67■■□□□ 1.06
Trim54-201ENSMUST00000013771 Clca2Q8BG22 942 aa21.67■■□□□ 1.06
Trim54-201ENSMUST00000013771 Map3k2Q61083 619 aa21.66■■□□□ 1.06
Trim54-201ENSMUST00000013771 Neurod2Q62414 383 aa21.66■■□□□ 1.06
Trim54-201ENSMUST00000013771 Ttc19Q8CC21 365 aa21.66■■□□□ 1.06
Trim54-201ENSMUST00000013771 Stard3nlQ9DCI3 235 aa21.66■■□□□ 1.06
Trim54-201ENSMUST00000013771 Rps8P62242 208 aaKnown RBP21.65■■□□□ 1.06
Trim54-201ENSMUST00000013771 GmpsQ3THK7 693 aa21.65■■□□□ 1.06
Trim54-201ENSMUST00000013771 Best3Q6H1V1 669 aa21.65■■□□□ 1.06
Trim54-201ENSMUST00000013771 Ankrd50F7BE84 1390 aa21.65■■□□□ 1.06
Trim54-201ENSMUST00000013771 Myo3bQ1EG27 1305 aa21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 Cyp2d11P24457 504 aa21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 Aplp1Q03157 653 aa21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 CrbnQ8C7D2 445 aa21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 Rtn4Q99P72 1162 aaKnown RBP21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 Echdc1Q9D9V3 322 aa21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 Lgr5Q9Z1P4 907 aa21.64■■□□□ 1.06
Trim54-201ENSMUST00000013771 Map3k15A2AQW0 1331 aa21.64■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms