RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 HIVEP2P31629 2446 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 UQCRHLA0A096LP55 91 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 H3BML4 177 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 RSL1D1O76021 490 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 NGFRP08138 427 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 TMEM44Q2T9K0 475 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 PDSS1Q5T2R2 415 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 TMEM107Q6UX40 140 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 SH2D5Q6ZV89 423 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 PLEKHM3Q6ZWE6 761 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 WDR75Q8IWA0 830 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 ACTRT2Q8TDY3 377 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 NUDT8Q8WV74 236 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 MARK4Q96L34 752 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 UBTD1Q9HAC8 227 aa16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 MCTS1Q9ULC4 181 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-227ENST00000602011 B4DXG7 233 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 NPIPB8E9PQR5 432 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 H7C1Q1 480 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 SMAD7O15105 426 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 SEC14L5O43304 696 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 CRCPO75575 148 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 SOX30O94993 753 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 HSPA4LO95757 839 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 ANGPTL1O95841 491 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 PABPC4LP0CB38 370 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 CTAGE8P0CG41 777 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 PRPS2P11908 318 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 DDX5P17844 614 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 TCEA1P23193 301 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 ECHS1P30084 290 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 HTR6P50406 440 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 CTBP2P56545 445 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 SIRPAP78324 504 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 NOXRED1Q6NXP6 359 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 ZCCHC12Q6PEW1 402 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 BEND4Q6ZU67 534 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 YTHDF3Q7Z739 585 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 MARCH3Q86UD3 253 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 STK32CQ86UX6 486 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 MISPQ8IVT2 679 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 CTAGE4Q8IX94 777 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 HOXB13Q92826 284 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 ZBTB8AQ96BR9 441 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 EBPLQ9BY08 206 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 GSTO2Q9H4Y5 243 aa16.01■□□□□ 0.15
SHKBP1-227ENST00000602011 CSPG4Q6UVK1 2322 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 C7orf72A4D263 438 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 ALG1L2C9J202 215 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 SIAH2O43255 324 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 NME6O75414 186 aaPredicted RBP16■□□□□ 0.15
SHKBP1-227ENST00000602011 UTS2O95399 124 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 PLGP00747 810 aaPredicted RBP16■□□□□ 0.15
SHKBP1-227ENST00000602011 PRPH2P23942 346 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 GABRA3P34903 492 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 CLDN20P56880 219 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 RAC1P63000 192 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 STX5Q13190 355 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 GTPBP8Q8N3Z3 284 aaPredicted RBP16■□□□□ 0.15
SHKBP1-227ENST00000602011 CCNYL1Q8N7R7 359 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 CDRT4Q8N9R6 151 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 OR6Y1Q8NGX8 325 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 ZFP28Q8NHY6 868 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 Q96MF0 132 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 USB1Q9BQ65 265 aaKnown RBP16■□□□□ 0.15
SHKBP1-227ENST00000602011 HDHD5Q9BXW7 423 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 KLHL4Q9C0H6 718 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 CXorf56Q9H5V9 222 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 NTMQ9P121 344 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 GPR52Q9Y2T5 361 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 ZANQ9Y493 2812 aa16■□□□□ 0.15
SHKBP1-227ENST00000602011 ADAMDEC1O15204 470 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 NDUFB5O43674 189 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 TBX19O60806 448 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 NKX2-2O95096 273 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 SYNGR4O95473 234 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 UROSP10746 265 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 MYL2P10916 166 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 GCAP28676 217 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 CCT5P48643 541 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 DNAJB13P59910 316 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 SLC29A2Q14542 456 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 CCDC153Q494R4 210 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 CFAP157Q5JU67 520 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 CPTPQ5TA50 214 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 ESPNLQ6ZVH7 1005 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 IFT20Q8IY31 132 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 CDC26Q8NHZ8 85 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 GPR151Q8TDV0 419 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 TMEM171Q8WVE6 324 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 ZBED6CLQ96FA7 236 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 PSMC3IPQ9P2W1 217 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 SNX8Q9Y5X2 465 aa15.99■□□□□ 0.15
SHKBP1-227ENST00000602011 H0YC42 278 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 SLC28A1O00337 649 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 RIPK2O43353 540 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 SS18L1O75177 396 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 GLRA3O75311 464 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 HPGDP15428 266 aa15.98■□□□□ 0.15
SHKBP1-227ENST00000602011 ME2P23368 584 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms