RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 GFRA1P56159 465 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 C21orf58P58505 322 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 POU6F2P78424 691 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-204ENST00000599398 SLC25A35Q3KQZ1 300 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 TLCD1Q96CP7 247 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 TRIM8Q9BZR9 551 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 NPDC1Q9NQX5 325 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-204ENST00000599398 FAF1Q9UNN5 650 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-204ENST00000599398 APCP25054 2843 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 LRBAP50851 2863 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 GMFGO60234 142 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 ZIC3O60481 467 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 ANGPTL1O95841 491 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 CPN1P15169 458 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 LBPP18428 481 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 HK1P19367 917 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 TIMP3P35625 211 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 CASP8Q14790 479 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 CCNJQ5T5M9 372 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 RAET1LQ5VY80 246 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 ATG16L1Q676U5 607 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 OR4F3Q6IEY1 312 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 APOOLQ6UXV4 268 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 NAXEQ8NCW5 288 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 OR5AK3PQ8NH89 298 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 PSMA8Q8TAA3 256 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 ZPLD1Q8TCW7 415 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 CDS1Q92903 461 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 TUBA1CQ9BQE3 449 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 BTBD2Q9BX70 525 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 ACTRT3Q9BYD9 372 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 MEAF6Q9HAF1 191 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 THAP1Q9NVV9 213 aa20.49■□□□□ 0.87
CCDC9-204ENST00000599398 MARCOQ9UEW3 520 aaPredicted RBP20.49■□□□□ 0.87
CCDC9-204ENST00000599398 CD8B2A6NJW9 211 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 DVL2O14641 736 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 OXSR1O95747 527 aaPredicted RBP20.48■□□□□ 0.87
CCDC9-204ENST00000599398 HPGDP15428 266 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 BMP5P22003 454 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 CHMP24386 653 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 CEACAM8P31997 349 aaPredicted RBP20.48■□□□□ 0.87
CCDC9-204ENST00000599398 SLC18A1P54219 525 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 HBA1P69905 142 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 C17orf67Q0P5P2 114 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 GANABQ14697 944 aaKnown RBP20.48■□□□□ 0.87
CCDC9-204ENST00000599398 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCDC9-204ENST00000599398 CDC73Q6P1J9 531 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 CAMKMTQ7Z624 323 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 ZAR1Q86SH2 424 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 OR4C3Q8NH37 302 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 FAM110BQ8TC76 370 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 SFXN5Q8TD22 340 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 ADAMTS15Q8TE58 950 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 MOAP1Q96BY2 351 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 STACQ99469 402 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 G6PC3Q9BUM1 346 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 CALHM2Q9HA72 323 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 DUSP22Q9NRW4 184 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 FBXO34Q9NWN3 711 aa20.48■□□□□ 0.87
CCDC9-204ENST00000599398 NDUFB5O43674 189 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 KRT16P08779 473 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 KITP10721 976 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 LHX2P50458 406 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 EXOSC6Q5RKV6 272 aaKnown RBP20.47■□□□□ 0.87
CCDC9-204ENST00000599398 CLECL1Q8IZS7 167 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 ZNF295-AS1Q8N0V1 137 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 GATSQ8NAP1 163 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 PIGUQ9H490 435 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 PCDHGB4Q9UN71 923 aa20.47■□□□□ 0.87
CCDC9-204ENST00000599398 MBD3L4A6NDZ8 208 aaPredicted RBP20.46■□□□□ 0.87
CCDC9-204ENST00000599398 MBD3L3A6NE82 208 aaPredicted RBP20.46■□□□□ 0.87
CCDC9-204ENST00000599398 MBD3L5A6NJ08 208 aaPredicted RBP20.46■□□□□ 0.87
CCDC9-204ENST00000599398 ALG1L2C9J202 215 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 SNNO75324 88 aaPredicted RBP20.46■□□□□ 0.87
CCDC9-204ENST00000599398 ATP6V1C1P21283 382 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 TBXA2RP21731 343 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 SSTR2P30874 369 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 DGKQP52824 942 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 B3GALT5-AS1P59052 145 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 BHLHB9Q6PI77 547 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 UBQLNLQ8IYU4 475 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 LRRC34Q8IZ02 419 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 ACBD4Q8NC06 268 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 OR5M1Q8NGP8 315 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 MBD3L2Q8NHZ7 208 aaPredicted RBP20.46■□□□□ 0.87
CCDC9-204ENST00000599398 RAB3IL1Q8TBN0 382 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 C1GALT1C1Q96EU7 318 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 MANSC1Q9H8J5 431 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 UBQLN4Q9NRR5 601 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 GPATCH2Q9NW75 528 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 FBN2P35556 2912 aa20.46■□□□□ 0.87
CCDC9-204ENST00000599398 TRPC5OSA6NMA1 111 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 CLCA1A8K7I4 914 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 RNASET2O00584 256 aaKnown RBP20.45■□□□□ 0.86
CCDC9-204ENST00000599398 SCDO00767 359 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 SDHDO14521 159 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 HDAC3O15379 428 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 NGFRP08138 427 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 ZNF708P17019 499 aa20.45■□□□□ 0.86
CCDC9-204ENST00000599398 IGFBP2P18065 325 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms