RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 STX5Q13190 355 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 RGNQ15493 299 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 COX20Q5RI15 118 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.75■□□□□ 0.43
DDX55-207ENST00000540763 ZAR1Q86SH2 424 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 MTDHQ86UE4 582 aaKnown RBP17.75■□□□□ 0.43
DDX55-207ENST00000540763 MISPQ8IVT2 679 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 TMEM251Q8N6I4 163 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 ANKS4BQ8N8V4 417 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 OR1J4Q8NGS1 313 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 RP9Q8TA86 221 aaKnown RBP17.75■□□□□ 0.43
DDX55-207ENST00000540763 ROPN1LQ96C74 230 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 AURKBQ96GD4 344 aaPredicted RBP17.75■□□□□ 0.43
DDX55-207ENST00000540763 TRNT1Q96Q11 434 aaKnown RBP17.75■□□□□ 0.43
DDX55-207ENST00000540763 CCT8L2Q96SF2 557 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 CCDC106Q9BWC9 280 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 SAP130Q9H0E3 1048 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 UBQLN3Q9H347 655 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 GALNT9Q9HCQ5 603 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 FBXO34Q9NWN3 711 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 SLAMF8Q9P0V8 285 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 C15orf41Q9Y2V0 281 aa17.75■□□□□ 0.43
DDX55-207ENST00000540763 NBASA2RRP1 2371 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 FREM3P0C091 2139 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 ZGRF1Q86YA3 2104 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 IGLV3-32A0A0A0MS00 114 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 FBP2O00757 339 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 SCDO00767 359 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 KIAA0513O60268 411 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 UNC5CO95185 931 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 IGHG3P01860 377 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 C1QCP02747 245 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 HPGDP15428 266 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 GPX2P18283 190 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 DCTP40126 519 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 RFC3P40938 356 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 CRATP43155 626 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 ATP12AP54707 1039 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 CASP9P55211 416 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 DSTNP60981 165 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 HPCAP84074 193 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 FUT5Q11128 374 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 NFYCQ13952 458 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 CYLC2Q14093 348 aaPredicted RBP17.74■□□□□ 0.43
DDX55-207ENST00000540763 TRMT5Q32P41 509 aaKnown RBP17.74■□□□□ 0.43
DDX55-207ENST00000540763 FLYWCH1Q4VC44 716 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 CMPK2Q5EBM0 449 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 MTERF4Q7Z6M4 381 aaKnown RBP17.74■□□□□ 0.43
DDX55-207ENST00000540763 SNX32Q86XE0 403 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 GHDCQ8N2G8 530 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 OR4C3Q8NH37 302 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 PNPT1Q8TCS8 783 aaKnown RBP17.74■□□□□ 0.43
DDX55-207ENST00000540763 RAB8BQ92930 207 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 CGREF1Q99674 301 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 FLRT3Q9NZU0 649 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 ARMCX1Q9P291 453 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 P2RX2Q9UBL9 471 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 SVILO95425 2214 aa17.74■□□□□ 0.43
DDX55-207ENST00000540763 FAM166BA8MTA8 275 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 EVPLLA8MZ36 301 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 NPIPA5E9PKD4 350 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 SCO2O43819 266 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 CBR3O75828 277 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 DCTN3O75935 186 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 CBX6O95503 412 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 ENDOUP21128 410 aaKnown RBP17.73■□□□□ 0.43
DDX55-207ENST00000540763 C17orf67Q0P5P2 114 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 GNA13Q14344 377 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 ZNF141Q15928 474 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 MMEL1Q495T6 779 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 RUNDC3AQ59EK9 446 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 REP15Q6BDI9 236 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 LRRC74BQ6ZQY2 392 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 GALNT10Q86SR1 603 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 PLCZ1Q86YW0 608 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 WDSUB1Q8N9V3 476 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 PCYOX1LQ8NBM8 494 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 JSRP1Q96MG2 331 aaPredicted RBP17.73■□□□□ 0.43
DDX55-207ENST00000540763 ANKRD27Q96NW4 1050 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 CPPED1Q9BRF8 314 aaPredicted RBP17.73■□□□□ 0.43
DDX55-207ENST00000540763 ACKR4Q9NPB9 350 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 CALML5Q9NZT1 146 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 PPP4R1LQ9P1A2 415 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 SEC14L3Q9UDX4 400 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.73■□□□□ 0.43
DDX55-207ENST00000540763 NPIPA1Q9UND3 350 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 WDR45Q9Y484 360 aa17.73■□□□□ 0.43
DDX55-207ENST00000540763 PRAMEF27A3QJZ7 478 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 TMEM247A6NEH6 219 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 MRASO14807 208 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 HCN1O60741 890 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 ANGPTL1O95841 491 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 RFPL3SP0C7P2 107 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 ETFAP13804 333 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 GDF1P27539 372 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 PRDX6P30041 224 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 MAGEA5P43359 124 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 GANABQ14697 944 aaKnown RBP17.72■□□□□ 0.43
DDX55-207ENST00000540763 KLHL26Q53HC5 615 aa17.72■□□□□ 0.43
DDX55-207ENST00000540763 GKAP1Q5VSY0 366 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms