RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 KLHL13Q9P2N7 655 aa9.43□□□□□ -0.9
COL4A6-208ENST00000538570 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SYT7O43581 403 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 M6PRP20645 277 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CHATP28329 748 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CNR2P34972 360 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CA5AP35218 305 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 TAS2R31P59538 309 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 TAS2R20P59543 309 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 OR4D1Q15615 310 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF791Q3KP31 576 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM69BQ5VUD6 431 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SHFQ7M4L6 423 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF419Q96HQ0 510 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 HOXD1Q9GZZ0 328 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MTHFD2LQ9H903 347 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 TRAPPC13A5PLN9 417 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 E7ESA3 106 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM72CH0Y354 149 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ADAM12O43184 909 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 PDGFAP04085 211 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 PRSS3P35030 304 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 BIDP55957 195 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CDK3Q00526 305 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 RING1Q06587 406 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM72AQ5TYM5 149 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MANEALQ5VSG8 457 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM72DQ6L9T8 149 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM72BQ86X60 149 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 UMODL1-AS1Q8N2C9 162 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SPIN2AQ99865 258 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SPIN2BQ9BPZ2 258 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SYNPO2LQ9H987 977 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ZBTB20Q9HC78 741 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 RLIMQ9NVW2 624 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ENPP5Q9UJA9 477 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MYO5BQ9ULV0 1848 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 A0A1W2PP55 124 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MEGF11A6BM72 1044 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 AQP9O43315 295 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SLC22A5O76082 557 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 BDKRB2P30411 391 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 STK19P49842 368 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CTXN1P60606 82 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 UBE2NP61088 152 aaKnown RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 RAB33AQ14088 237 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 DPY19L4Q7Z388 723 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM217AQ8IXS0 508 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 C16orf78Q8WTQ4 265 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 IL17FQ96PD4 163 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 GPR52Q9Y2T5 361 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 A8MXE2 369 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 HTR3BO95264 441 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 DCNP07585 359 aaKnown RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MAKP20794 623 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SSTR2P30874 369 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CASP3P42574 277 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CASP6P55212 293 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MICAQ29983 383 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 PSAPL1Q6NUJ1 521 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF596Q8TC21 504 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 CREB3L4Q8TEY5 395 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 C10orf90Q96M02 699 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 SUCNR1Q9BXA5 334 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 TSPAN10Q9H1Z9 355 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 OR1A2Q9Y585 309 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 NAP1L6A6NFF2 107 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 AGPAT2O15120 278 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 PPP1R3DO95685 299 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 KNG1P01042 644 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 GJA5P36382 358 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 DUSP6Q16828 381 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 DPY19L2P1Q6NXN4 242 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 UEVLDQ8IX04 471 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 FAM83FQ8NEG4 500 aaPredicted RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
COL4A6-208ENST00000538570 C22orf15Q8WYQ4 148 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 L3HYPDHQ96EM0 354 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 ACTRT3Q9BYD9 372 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 MOB1AQ9H8S9 216 aa9.42□□□□□ -0.9
COL4A6-208ENST00000538570 GJB5O95377 273 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 CPNE6O95741 557 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 CAV2P51636 162 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ERVK-16P61578 105 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 IDO2Q6ZQW0 420 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SGPP2Q8IWX5 399 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 NRMQ8IXM6 262 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 CLECL1Q8IZS7 167 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SLC7A13Q8TCU3 470 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 ANKRD60Q9BZ19 345 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 SLAMF7Q9NQ25 335 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 DZANK1Q9NVP4 752 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 GRXCR2A6NFK2 248 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 A6NL46 340 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 GJE1A6NN92 205 aa9.41□□□□□ -0.9
COL4A6-208ENST00000538570 J3QR89 54 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms