RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 TBL1XR1Q9BZK7 514 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 TRIM8Q9BZR9 551 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 TMEM45AQ9NWC5 275 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 VAPAQ9P0L0 249 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 PPP4R1LQ9P1A2 415 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 TNFRSF10DQ9UBN6 386 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 SH3BGRL2Q9UJC5 107 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 LEF1Q9UJU2 399 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 OSGIN2Q9Y236 505 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 C15orf41Q9Y2V0 281 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 NDUFAF1Q9Y375 327 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 PHF3Q92576 2039 aaKnown RBP11.7□□□□□ -0.54
VEGFA-224ENST00000523873 HIVEP3Q5T1R4 2406 aa11.7□□□□□ -0.54
VEGFA-224ENST00000523873 CFAP46Q8IYW2 2715 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 DUXAA6NLW8 204 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 CLIC1O00299 241 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 ANGPT2O15123 496 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 SNX3O60493 162 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 FCMRO60667 390 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 KRT75O95678 551 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 ANGPTL1O95841 491 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 NUDT7P0C024 238 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 ENDOUP21128 410 aaKnown RBP11.69□□□□□ -0.54
VEGFA-224ENST00000523873 DCTP40126 519 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 CRATP43155 626 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 SNTA1Q13424 505 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 SLC10A1Q14973 349 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 CD226Q15762 336 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 SYPL1Q16563 259 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 NDUFAF6Q330K2 333 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 FLYWCH1Q4VC44 716 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 GPAT3Q53EU6 434 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 EIPR1Q53HC9 387 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 LRIF1Q5T3J3 769 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 DHDDSQ86SQ9 333 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 YRDCQ86U90 279 aaKnown RBP11.69□□□□□ -0.54
VEGFA-224ENST00000523873 SNX32Q86XE0 403 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 PLCZ1Q86YW0 608 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 GHDCQ8N2G8 530 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 C10orf111Q8N326 155 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 ZNF614Q8N883 585 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 ROPN1LQ96C74 230 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 KLHDC3Q9BQ90 382 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 G6PC3Q9BUM1 346 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 UBQLN3Q9H347 655 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 DSN1Q9H410 356 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 IKZF5Q9H5V7 419 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 LDAHQ9H6V9 325 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 EXD2Q9NVH0 621 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 MED11Q9P086 117 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 SPRR3Q9UBC9 169 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 B4GALT7Q9UBV7 327 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-224ENST00000523873 KCNE5Q9UJ90 142 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 MKLN1Q9UL63 735 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 ABCG2Q9UNQ0 655 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 PCDHGB3Q9Y5G1 929 aa11.69□□□□□ -0.54
VEGFA-224ENST00000523873 DIDO1Q9BTC0 2240 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 TRBV5-3A0A0A0MS03 114 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 LOC100653049A0A140TA62 436 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 ALG1L2C9J202 215 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 SCDO00767 359 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 OIP5O43482 229 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 TNFRSF21O75509 655 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 KRT34O76011 436 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 CHRM4P08173 479 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 TBXA2RP21731 343 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 ELAVL4P26378 380 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 CLK3P49761 638 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 DSTNP60981 165 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 CHRNEQ04844 493 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 NFYCQ13952 458 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 SELPLGQ14242 412 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 CAPRIN1Q14444 709 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 MAPK11Q15759 364 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 KRTCAP3Q53RY4 240 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 RPS26P11Q5JNZ5 115 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 WIPI1Q5MNZ9 446 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 ATAD3BQ5T9A4 648 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 TYW3Q6IPR3 259 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 DLEU7Q6UYE1 221 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 TRILQ7L0X0 811 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 MTDHQ86UE4 582 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 POU5F2Q8N7G0 328 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 OR2M3Q8NG83 312 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 OR4K17Q8NGC6 315 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 DUSP19Q8WTR2 217 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 ARSGQ96EG1 525 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 SH3YL1Q96HL8 342 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 ZNF350Q9GZX5 532 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 QRSL1Q9H0R6 528 aaKnown RBP11.68□□□□□ -0.54
VEGFA-224ENST00000523873 RUBCNLQ9H714 662 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 EXO5Q9H790 373 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 UBQLN4Q9NRR5 601 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 SLC6A5Q9Y345 797 aa11.68□□□□□ -0.54
VEGFA-224ENST00000523873 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms