RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	LOC100289279	A0A1B0GTE1	492 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	CXorf49	A8MYA2	514 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	SHISA8	B8ZZ34	492 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	TCF21	O43680	179 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	GMFG	O60234	142 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	RAMP1	O60894	148 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	NME6	O75414	186 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ADA	P00813	363 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	CSF3	P09919	207 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	BMP4	P12644	408 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ZNF17	P17021	662 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	PTN	P21246	168 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ME2	P23368	584 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	CCNG1	P51959	295 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	PSMD4	P55036	377 aa	Known RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	TRA2B	P62995	288 aa	Known RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ZNF155	Q12901	538 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	DLG1	Q12959	904 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ITGAD	Q13349	1161 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	DECR1	Q16698	335 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	CYP27C1	Q4G0S4	372 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	SGO1	Q5FBB7	561 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	GRTP1	Q5TC63	336 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	HBM	Q6B0K9	141 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	METTL2B	Q6P1Q9	378 aa	Known RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ESPNL	Q6ZVH7	1005 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	SSX8	Q7RTT4	187 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	GALNT10	Q86SR1	603 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ATG4D	Q86TL0	474 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	MARCH3	Q86UD3	253 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	FBXL14	Q8N1E6	418 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	RFLNB	Q8N5W9	214 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ZNF525	Q8N782	197 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	BANP	Q8N9N5	519 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	OR2V1	Q8NHB1	315 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	NXNL1	Q96CM4	212 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	CDK15	Q96Q40	435 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	ELOVL6	Q9H5J4	265 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	HHATL	Q9HCP6	504 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	CBLN4	Q9NTU7	201 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	FAM120C	Q9NX05	1096 aa	Known RBP	11.17	□□□□□ -0.62
DDX41-215	ENST00000512431	POU2F3	Q9UKI9	436 aa		11.17	□□□□□ -0.62
DDX41-215	ENST00000512431		A0A087WZY1	265 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	CCDC189	A1A4V9	331 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	SHISA9	B4DS77	424 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431		E7ESA3	106 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	ABCD4	O14678	606 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	TNFSF11	O14788	317 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	ADAMDEC1	O15204	470 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	KIAA0513	O60268	411 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	COQ9	O75208	318 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	OPN1LW	P04000	364 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	CFP	P27918	469 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	SSTR1	P30872	391 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	TTK	P33981	857 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	CARD18	P57730	90 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	RAC1	P63000	192 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	PPA1	Q15181	289 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	RNPS1	Q15287	305 aa	Known RBP	11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	STK11	Q15831	433 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	FAM83E	Q2M2I3	478 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	TMEM44	Q2T9K0	475 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	TFAP2E	Q6VUC0	442 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	CMC1	Q7Z7K0	106 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	CTAGE3P	Q8IX95	158 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	OR9A2	Q8NGT5	310 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	C10orf105	Q8TEF2	133 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	OSTF1	Q92882	214 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	OSBPL9	Q96SU4	736 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	L2HGDH	Q9H9P8	463 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431		Q9N2J8	555 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	TIGAR	Q9NQ88	270 aa		11.16	□□□□□ -0.62
DDX41-215	ENST00000512431	OR7A17	O14581	309 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	PLOD3	O60568	738 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	ANGPTL1	O95841	491 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	MPI	P34949	423 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	RFX3	P48380	749 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	PSG6	Q00889	435 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	DR1	Q01658	176 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	ACAP2	Q15057	778 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	ZNHIT3	Q15649	155 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	KLC3	Q6P597	504 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	MEX3D	Q86XN8	651 aa	Known RBP	11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	FAM9C	Q8IZT9	166 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	DEPDC4	Q8N2C3	294 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	MUC15	Q8N387	334 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	OR2W6P	Q8NHA6	318 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	HTRA1	Q92743	480 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	ZBTB8A	Q96BR9	441 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	ADGRG7	Q96K78	797 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	DHRS9	Q9BPW9	319 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	RTN4R	Q9BZR6	473 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	TRIM31	Q9BZY9	425 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	FLRT3	Q9NZU0	649 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	CPSF2	Q9P2I0	782 aa	Known RBP	11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	MGAT4B	Q9UQ53	548 aa		11.15	□□□□□ -0.62
DDX41-215	ENST00000512431	IGLV3-32	A0A0A0MS00	114 aa		11.14	□□□□□ -0.63
DDX41-215	ENST00000512431	SLC35F4	A4IF30	521 aa		11.14	□□□□□ -0.63

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