RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TTYH1Q9H313 450 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CWH43Q9H720 699 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 A4GALTQ9NPC4 353 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CD93Q9NPY3 652 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CA10Q9NS85 328 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 RPS6KB2Q9UBS0 482 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KIF26AQ9ULI4 1882 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 IGLV3-16A0A075B6K0 115 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 RTCAO00442 366 aaKnown RBP12.88□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF197O14709 1029 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 FRS3O43559 492 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 CBX7O95931 251 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 PEPDP12955 493 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 RPL35P42766 123 aaKnown RBP12.88□□□□□ -0.35
NPHP4-207ENST00000470763 CBX5P45973 191 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 ARHGDIBP52566 201 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 MAZP56270 477 aaKnown RBP12.88□□□□□ -0.35
NPHP4-207ENST00000470763 NDUFA9Q16795 377 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 SYTL3Q4VX76 610 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 CD300LDQ6UXZ3 194 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 PRICKLE2Q7Z3G6 844 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 OR56B4Q8NH76 319 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF607Q96SK3 696 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 MGAT4CQ9UBM8 478 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 OR51B4Q9Y5P0 310 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 CDH23Q9H251 3354 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 A0A087WUU8 490 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 FAM170BA6NMN3 283 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 A8MXK9 166 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 GMDSO60547 372 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 KCNJ13O60928 360 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
NPHP4-207ENST00000470763 BUD31P41223 144 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-207ENST00000470763 ENTPD8Q5MY95 495 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 TPRG1Q6ZUI0 275 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 ECHDC3Q96DC8 303 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 NEURL3Q96EH8 262 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 DMRTA2Q96SC8 542 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 NPAS1Q99742 590 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 DPYSL5Q9BPU6 564 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 QRSL1Q9H0R6 528 aaKnown RBP12.88□□□□□ -0.35
NPHP4-207ENST00000470763 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 GPR160Q9UJ42 338 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
NPHP4-207ENST00000470763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TRABD2BA6NFA1 517 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ANXA2P2A6NMY6 339 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 MID1O15344 667 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SLC34A2O95436 690 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SERPINA4P29622 427 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TBPL1P62380 186 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 E2F1Q01094 437 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SLC3A1Q07837 685 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF169Q14929 603 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SERINC5Q86VE9 423 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 LRRTM4Q86VH4 590 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 KLK6Q92876 244 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SCPEP1Q9HB40 452 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 HPF1Q9NWY4 346 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 COPZ2Q9P299 210 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TRPC4Q9UBN4 977 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 LIPT1Q9Y234 373 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 PEX14O75381 377 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SIX6O95475 246 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 GPR17Q13304 367 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TMEM255AQ5JRV8 349 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ANKRD53Q8N9V6 530 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 OR4Q3Q8NH05 313 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 DPH7Q9BTV6 452 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 OR51I1Q9H343 314 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TUBAL3A6NHL2 446 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 PRR23D1E9PI22 279 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SYN3O14994 580 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TSPAN6O43657 245 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 EPPINO95925 133 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 PRR23D2P0DMB1 279 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 NR2F1P10589 423 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 SYN1P17600 705 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 F8A1P23610 371 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 PDHA2P29803 388 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 RPL3P39023 403 aaKnown RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 CEACAM19Q7Z692 300 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 RFKQ969G6 155 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 EXOSC8Q96B26 276 aaKnown RBP12.87□□□□□ -0.35
NPHP4-207ENST00000470763 PLD4Q96BZ4 506 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ALG14Q96F25 216 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 ZCCHC4Q9H5U6 513 aa12.87□□□□□ -0.35
NPHP4-207ENST00000470763 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
NPHP4-207ENST00000470763 E9PI62 339 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms