RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 TNFSF14O43557 240 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ITM2AO43736 263 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 UGT2B11O75310 529 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TDP2O95551 362 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NDST3O95803 873 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NUDT3O95989 172 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CXCL10P02778 98 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 LCATP04180 440 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 RPLP2P05387 115 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TFAP2AP05549 437 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 APRTP07741 180 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ERCC1P07992 297 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZNF806P0C7X5 589 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TRAPPC2P0DI81 140 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TRAPPC2BP0DI82 140 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 HAPLN1P10915 354 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 FGF5P12034 268 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 IFI30P13284 250 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 OSMP13725 252 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CD19P15391 556 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZP3P21754 424 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 UGT1A4P22310 534 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 FDXRP22570 491 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MMP8P22894 467 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ATP5A1P25705 553 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 PSMB5P28074 263 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 GJB2P29033 226 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SSTR2P30874 369 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 FOXN2P32314 431 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 UGT1A5P35504 534 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 GJC1P36383 396 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CEACAM3P40198 252 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NR4A2P43354 598 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 FMO5P49326 533 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 DNA2P51530 1060 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CCR6P51684 374 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CDC42P60953 191 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 COPZ1P61923 177 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MRPS22P82650 360 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MYBPC1Q00872 1141 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CKAP4Q07065 602 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SERTAD2Q14140 314 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 KRT81Q14533 505 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 IL11RAQ14626 422 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 P2RY14Q15391 338 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MPPED2Q15777 294 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 VAMP3Q15836 100 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ATP6AP1Q15904 470 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CALCRLQ16602 461 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 DUSP6Q16828 381 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SOWAHAQ2M3V2 549 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TMEM249Q2WGJ8 235 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CDNFQ49AH0 187 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 RABL3Q5HYI8 236 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 PCID2Q5JVF3 399 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CERCAMQ5T4B2 595 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 RAET1LQ5VY80 246 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 LPCAT3Q6P1A2 487 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MED27Q6P2C8 311 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SH2D5Q6ZV89 423 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 G2E3Q7L622 706 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 OVCH1Q7RTY7 1134 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MRPL52Q86TS9 123 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 TSPAN33Q86UF1 283 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SATL1Q86VE3 508 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 THOC6Q86W42 341 aaKnown RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 PRIMA1Q86XR5 153 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 RAB43Q86YS6 212 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 LRRC75A-AS1Q8N1F1 130 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CLIP4Q8N3C7 705 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZNF276Q8N554 614 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 Q8N9G6 341 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 HSD17B11Q8NBQ5 300 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NECAP1Q8NC96 275 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 DMBX1Q8NFW5 382 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 OR2M7Q8NG81 312 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 OR4D6Q8NGJ1 314 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 OR2L2Q8NH16 312 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZFP28Q8NHY6 868 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SCARB1Q8WTV0 552 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SLC25A43Q8WUT9 341 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 CDS1Q92903 461 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ERGIC1Q969X5 290 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ARRDC3Q96B67 414 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 KLHL29Q96CT2 875 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 SMIM12Q96EX1 92 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 LINC00615Q96LM1 132 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 C3orf30Q96M34 536 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 KLHL15Q96M94 604 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ZNF583Q96ND8 569 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MCCC1Q96RQ3 725 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 WDR77Q9BQA1 342 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 NICN1Q9BSH3 213 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 PDCD10Q9BUL8 212 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 EGLN1Q9GZT9 426 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 MAGT1Q9H0U3 335 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 S1PR5Q9H228 398 aa4.41□□□□□ -1.7
HMGB3P9-201ENST00000441799 ANKRD19PQ9H560 264 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 1163.7 ms