RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 OMA1Q96E52 524 aa17.12■□□□□ 0.33
PNKP-224ENST00000631020 SIGLEC12Q96PQ1 595 aa17.12■□□□□ 0.33
PNKP-224ENST00000631020 UNC79Q9P2D8 2635 aa17.12■□□□□ 0.33
PNKP-224ENST00000631020 PRAMEF27A3QJZ7 478 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 A8MVJ9 347 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 TSPAN2O60636 221 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 KCNK2O95069 426 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 STSP08842 583 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 NAGAP17050 411 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 CRATP43155 626 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 CYB561P49447 251 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 FBXW4P57775 412 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 MTPNP58546 118 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 MRPS22P82650 360 aaKnown RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 PLCXD2Q0VAA5 305 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 SPINK14Q6IE38 97 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 C8orf82Q6P1X6 216 aaPredicted RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 GALNT10Q86SR1 603 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 COX18Q8N8Q8 333 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 MDS2Q8NDY4 140 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 ROPN1LQ96C74 230 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 SPACA9Q96E40 222 aaPredicted RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 RMND5BQ96G75 393 aaPredicted RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 NSL1Q96IY1 281 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 GPATCH1Q9BRR8 931 aaKnown RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 UTP23Q9BRU9 249 aaKnown RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 BTBD2Q9BX70 525 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 GID8Q9NWU2 228 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 DIDO1Q9BTC0 2240 aaKnown RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 DUXAA6NLW8 204 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 ASNA1O43681 348 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 REM1O75628 298 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 PPM1BO75688 479 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 NEURL1O76050 574 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 NUDT7P0C024 238 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 SLC6A2P23975 617 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 KHKP50053 298 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 NUDT2P50583 147 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 PER3P56645 1201 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 POU6F2P78424 691 aaPredicted RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 OC90Q02509 493 aaPredicted RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 ZNF766Q5HY98 468 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 RABL3Q5HYI8 236 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 CCNJQ5T5M9 372 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 HEPHL1Q6MZM0 1159 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 FIGNL1Q6PIW4 674 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 MDGA2Q7Z553 956 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 ZAR1Q86SH2 424 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 OR5M3Q8NGP4 307 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 EFHD2Q96C19 240 aaPredicted RBP17.11■□□□□ 0.33
PNKP-224ENST00000631020 ADOQ96SZ5 270 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 HPF1Q9NWY4 346 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 LRFN1Q9P244 771 aa17.11■□□□□ 0.33
PNKP-224ENST00000631020 UGT2B11O75310 529 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 TNFRSF21O75509 655 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 UBOX5O94941 541 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 SOX30O94993 753 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 IL33O95760 270 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 ESRRAP11474 423 aaPredicted RBP17.1■□□□□ 0.33
PNKP-224ENST00000631020 PPIBP23284 216 aaKnown RBP17.1■□□□□ 0.33
PNKP-224ENST00000631020 FUT5Q11128 374 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 ART3Q13508 389 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 OR1C1Q15619 314 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 MAPK11Q15759 364 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 NTRK2Q16620 822 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 DECR1Q16698 335 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 HACD2Q6Y1H2 254 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 OLIG3Q7RTU3 272 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 MAMDC2Q7Z304 686 aaPredicted RBP17.1■□□□□ 0.33
PNKP-224ENST00000631020 CHDHQ8NE62 594 aaPredicted RBP17.1■□□□□ 0.33
PNKP-224ENST00000631020 OR10G3Q8NGC4 313 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 DIO2Q92813 273 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 HGDQ93099 445 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 SCMH1Q96GD3 660 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 SDF2Q99470 211 aa17.1■□□□□ 0.33
PNKP-224ENST00000631020 THUMPD3Q9BV44 507 aaKnown RBP17.1■□□□□ 0.33
PNKP-224ENST00000631020 A0A1B0GUH1 482 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 EVPLLA8MZ36 301 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 BMP2P12643 396 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 MAGEA8P43361 318 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 RFX3P48380 749 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 PSPHP78330 225 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.09■□□□□ 0.33
PNKP-224ENST00000631020 ARHGAP11BQ3KRB8 267 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 DCST2Q5T1A1 773 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 GPALPP1Q8IXQ4 340 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 CYP4Z2PQ8N1L4 340 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 FAM13CQ8NE31 585 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 OR8J3Q8NGG0 315 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 RAD21L1Q9H4I0 556 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 KAT8Q9H7Z6 458 aaKnown RBP17.09■□□□□ 0.33
PNKP-224ENST00000631020 SH2D2AQ9NP31 389 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 RYDENQ9NUL5 291 aaKnown RBP17.09■□□□□ 0.33
PNKP-224ENST00000631020 OSGIN2Q9Y236 505 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 PCDHGB3Q9Y5G1 929 aa17.09■□□□□ 0.33
PNKP-224ENST00000631020 CHCHD2Q9Y6H1 151 aaPredicted RBP17.09■□□□□ 0.33
PNKP-224ENST00000631020 OR6C70A6NIJ9 312 aa17.08■□□□□ 0.32
PNKP-224ENST00000631020 DNAJC8O75937 253 aaPredicted RBP17.08■□□□□ 0.32
PNKP-224ENST00000631020 AGR2O95994 175 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms