RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TMEM216Q9P0N5 145 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF337Q9Y3M9 751 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 MED12LQ86YW9 2145 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 IGLV3-32A0A0A0MS00 114 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 DEFB108AA8MXU0 73 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 IL33O95760 270 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 CGAP01215 116 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 TBXA2RP21731 343 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 NTSP30990 170 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 KCNJ5P48544 419 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 NCBP2P52298 156 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF155Q12901 538 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF474Q6S9Z5 364 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 IKBIPQ70UQ0 350 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 FAM214BQ7L5A3 538 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 OR2L13Q8N349 312 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 CIARTQ8N365 385 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 METTL25Q8N6Q8 603 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 OR4N2Q8NGD1 307 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 ARSGQ96EG1 525 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 C1GALT1C1Q96EU7 318 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 TMEM237Q96Q45 408 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 ANKRA2Q9H9E1 313 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 GLRX2Q9NS18 164 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 DDX18Q9NVP1 670 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 DCDC2Q9UHG0 476 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 DMGDHQ9UI17 866 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 PROCRQ9UNN8 238 aa16.06■□□□□ 0.16
SHKBP1-227ENST00000602011 A0A087WZY1 265 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 OR2M5A3KFT3 312 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 URI1O94763 535 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 LY6G6DO95868 133 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 CHN1P15882 459 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 IL11P20809 199 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 SGCBQ16585 318 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 VPS26BQ4G0F5 336 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 SPDYAQ5MJ70 313 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 Q5PR19 223 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 TCHHL1Q5QJ38 904 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 VWA1Q6PCB0 445 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 TRMT10CQ7L0Y3 403 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 TRIM46Q7Z4K8 759 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 UBQLNLQ8IYU4 475 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 DUSP19Q8WTR2 217 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 COX4I2Q96KJ9 171 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 LMF2Q9BU23 707 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 PINK1Q9BXM7 581 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 OR10A4Q9H209 315 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 PLSCR4Q9NRQ2 329 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 KLHL28Q9NXS3 571 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 MED11Q9P086 117 aa16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 C6orf203Q9P0P8 240 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-227ENST00000602011 UPK1AO00322 258 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 SCO2O43819 266 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 KCNH1O95259 989 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 PSMG1O95456 288 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 LCN1P31025 176 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 CLDN15P56746 228 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 PRR5P85299 388 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 IMPG1Q17R60 797 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 SH2D4BQ5SQS7 431 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 GTF2IRD2BQ6EKJ0 949 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 FAM71E1Q6IPT2 247 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 GTF2IRD2Q86UP8 949 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 EXOC3L1Q86VI1 746 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 CEP70Q8NHQ1 597 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 FIG4Q92562 907 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 ELP4Q96EB1 424 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 PIK3IP1Q96FE7 263 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 CCL19Q99731 98 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 TBL1XR1Q9BZK7 514 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 RRAGDQ9NQL2 400 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 EMC9Q9Y3B6 208 aa16.04■□□□□ 0.16
SHKBP1-227ENST00000602011 TLN2Q9Y4G6 2542 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 JUNP05412 331 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 PAX1P15863 534 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF17P17021 662 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 PCSK6P29122 969 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 SUCLG1P53597 346 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 NR1H2P55055 460 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 BTKQ06187 659 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 PON3Q15166 354 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 GUSBP1Q15486 140 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 BEX5Q5H9J7 111 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 UBAP2Q5T6F2 1119 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF610Q8N9Z0 462 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 OR6K3Q8NGY3 331 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 FNDC9Q8TBE3 224 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF764Q96H86 408 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 GMPPAQ96IJ6 420 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 AMDHD1Q96NU7 426 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 PRRG4Q9BZD6 226 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 GSX2Q9BZM3 304 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 OPN3Q9H1Y3 402 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 GLIPR2Q9H4G4 154 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 MID1IP1Q9NPA3 183 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 TIMM22Q9Y584 194 aa16.03■□□□□ 0.16
SHKBP1-227ENST00000602011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms