RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ORAI2Q96SN7 254 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 LRRC3Q9BY71 257 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 POLDIP3Q9BY77 421 aaKnown RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 PDE7BQ9NP56 450 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 RBM22Q9NW64 420 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 OPN4Q9UHM6 478 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ABCD4O14678 606 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 SLC19A2O60779 497 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 PET100P0DJ07 73 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 CLCN5P51795 746 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 COMMD2Q86X83 199 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 PLPP5Q8NEB5 264 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 HAVCR1Q96D42 359 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF778Q96MU6 729 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 GPR137Q96N19 417 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF300Q96RE9 604 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ALKBH7Q9BT30 221 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 HMGXB3Q12766 1538 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 UNC119BA6NIH7 251 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 PRODHO43272 600 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 RPS6KA4O75676 772 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 JMJD7P0C870 316 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 DHRS4L1P0CG22 281 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 GAAP10253 952 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 CLDN20P56880 219 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 SMAD3P84022 425 aaKnown RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 GTDC1Q4AE62 458 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 TRIM46Q7Z4K8 759 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 NXPE1Q8N323 547 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 NTAN1Q96AB6 310 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF707Q96C28 371 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 PGAM5Q96HS1 289 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ACO2Q99798 780 aaKnown RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 TUBB1Q9H4B7 451 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 IMP3Q9NV31 184 aaKnown RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 CLTCL1P53675 1640 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 DRGXA6NNA5 263 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF850A8MQ14 1090 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 REM1O75628 298 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 GABRB1P18505 474 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 SERPINA2P20848 420 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 TRHRP34981 398 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ARL2P36404 184 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 RFX2P48378 723 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 MPEG1Q2M385 716 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 APOBEC3HQ6NTF7 200 aaKnown RBP8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 DBX2Q6ZNG2 339 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 GABRG1Q8N1C3 465 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 OR5L2Q8NGL0 311 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 OR4A15Q8NGL6 344 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 SELENOMQ8WWX9 145 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ASB13Q8WXK3 278 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 SMPDL3AQ92484 453 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 ULBP1Q9BZM6 244 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 FLVCR2Q9UPI3 526 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.05
GTF2A1-203ENST00000553612 DLX3O60479 287 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CXCL3P19876 107 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CHRNA4P43681 627 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ZBTB6Q15916 424 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR5M10Q6IEU7 315 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SPRED1Q7Z699 444 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 LRRC28Q86X40 367 aaPredicted RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF619Q8N2I2 560 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR10G2Q8NGC3 310 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 REEP6Q96HR9 211 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 RNF2Q99496 336 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 COA1Q9GZY4 146 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SDCBP2Q9H190 292 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SMOC1Q9H4F8 434 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 VNN3Q9NY84 501 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ZDHHC8Q9ULC8 765 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ABCC6O95255 1503 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 RECQL4O94761 1208 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 IGF2P01344 180 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 IVDP26440 423 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NPBWR1P48145 328 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 RABGGTBP53611 331 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 RAB31Q13636 194 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PIM3Q86V86 326 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CHST14Q8NCH0 376 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 GPR26Q8NDV2 337 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR5M8Q8NGP6 311 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR10J5Q8NHC4 309 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 DCUN1D4Q92564 292 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 YIPF6Q96EC8 236 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SORT1Q99523 831 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 P2RX7Q99572 595 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OXSMQ9NWU1 459 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TNFSF13BQ9Y275 285 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SERTM2A0A1B0GWG4 89 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TTC24A2A3L6 582 aaPredicted RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TMEM218A2RU14 115 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PRRT4C9JH25 899 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SEC14L5O43304 696 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 MATN4O95460 622 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SEC61A1P61619 476 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SPHARQ15513 63 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms