RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 WASH3PC4AMC7 463 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 FZD7O75084 574 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 GIFP27352 417 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 HOXD10P28358 340 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 SRP9P49458 86 aaKnown RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 KHKP50053 298 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ANXA11P50995 505 aaKnown RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ST3GAL2Q16842 350 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 TMCO2Q7Z6W1 182 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 MS4A15Q8N5U1 240 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 OR56B4Q8NH76 319 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 YIPF5Q969M3 257 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 AHCYL2Q96HN2 611 aaKnown RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 RHBGQ9H310 441 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 IL20Q9NYY1 176 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 H2AFY2Q9P0M6 372 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ENTPD4Q9Y227 616 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 M0R233 179 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 SYT5O00445 386 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 UBL3O95164 117 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 EFEMP2O95967 443 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 FPR3P25089 353 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 SSTR2P30874 369 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 BSGP35613 385 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 OMPP47874 163 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 TM4SF4P48230 202 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 TAS2R41P59536 307 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 MAP4K2Q12851 820 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 PGGHGQ32M88 737 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 CLEC12AQ5QGZ9 265 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 SLC22A10Q63ZE4 541 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 FAM129CQ86XR2 697 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 CHST14Q8NCH0 376 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 OR4Q3Q8NH05 313 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ABCG4Q9H172 646 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 RDH8Q9NYR8 311 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 PRKAG2Q9UGJ0 569 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 KLF15Q9UIH9 416 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 PLXND1Q9Y4D7 1925 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 A0A0G2JPF8 293 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 HNRNPCL2B2RXH8 293 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 HNRNPCL3B7ZW38 293 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 GRM6O15303 877 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 HNRNPCL4P0DMR1 293 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 PBLDP30039 288 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 LCN1P31025 176 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 BUD31P41223 144 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 PRAMEF8Q5VWM4 474 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 PRAMEF7Q5VXH5 474 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 LCTLQ6UWM7 567 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 IL20RBQ6UXL0 311 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 SIAH3Q8IW03 269 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 OR2T4Q8NH00 348 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 TRMT10AQ8TBZ6 339 aaKnown RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 GIMAP1Q8WWP7 306 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 ZNF436Q9C0F3 470 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 DDX31Q9H8H2 851 aaKnown RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 MED9Q9NWA0 146 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 CNIH4Q9P003 139 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 TRPC4Q9UBN4 977 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 LRFN2Q9ULH4 789 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 hCG_1807616A0A1W2PRN6 198 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 DVL2O14641 736 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 HOXA2O43364 376 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 FGBP02675 491 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 HMGN1P05114 100 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 GNSP15586 552 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 RAB8AP61006 207 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 PRAMEF14Q5SWL7 426 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 PRAMEF13Q5VWM6 474 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 TXNDC8Q6A555 127 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 BAIAP2L2Q6UXY1 529 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 RRM2BQ7LG56 351 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 NPAS4Q8IUM7 802 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 GID4Q8IVV7 300 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 ACBD7Q8N6N7 88 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 OR5D16Q8NGK9 328 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 RPLP0P6Q8NHW5 317 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 EXOSC8Q96B26 276 aaKnown RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 TOE1Q96GM8 510 aaKnown RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 FAM46AQ96IP4 442 aaKnown RBP16.48■□□□□ 0.23
RAB40C-205ENST00000539661 KCNK12Q9HB15 430 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 TRIM36Q9NQ86 728 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 TMEM5Q9Y2B1 443 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 CSNK1G3Q9Y6M4 447 aa16.48■□□□□ 0.23
RAB40C-205ENST00000539661 SSNA1O43805 119 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 CFDP00746 253 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-205ENST00000539661 DRD2P14416 443 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 SHC1P29353 583 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 ST3GAL3Q11203 375 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 DYRK1AQ13627 763 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 SLC30A6Q6NXT4 461 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 BHLHB9Q6PI77 547 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 MS4A8Q9BY19 250 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 ISG20L2Q9H9L3 353 aaKnown RBP16.47■□□□□ 0.23
RAB40C-205ENST00000539661 CTPS2Q9NRF8 586 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 KCMF1Q9P0J7 381 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 MYO7AQ13402 2215 aa16.47■□□□□ 0.23
RAB40C-205ENST00000539661 MTCL1Q9Y4B5 1905 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms