RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PKIBQ9C010 78 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 FN3KRPQ9HA64 309 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 SLC25A19Q9HC21 320 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 RBM28Q9NW13 759 aaKnown RBP1.93□□□□□ -2.1
LMNB1-207ENST00000494185 GDAP2Q9NXN4 497 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 GPR83Q9NYM4 423 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 KLRF1Q9NZS2 232 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 PIPOXQ9P0Z9 390 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 MBD2Q9UBB5 411 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 GALPQ9UBC7 116 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 CIDEBQ9UHD4 219 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 CRLS1Q9UJA2 301 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 ZNF346Q9UL40 294 aaKnown RBP1.93□□□□□ -2.1
LMNB1-207ENST00000494185 EIF3LQ9Y262 564 aaKnown RBP1.93□□□□□ -2.1
LMNB1-207ENST00000494185 CAB39Q9Y376 341 aaPredicted RBP1.93□□□□□ -2.1
LMNB1-207ENST00000494185 MRPS18CQ9Y3D5 142 aaKnown RBP1.93□□□□□ -2.1
LMNB1-207ENST00000494185 WDR45Q9Y484 360 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 NSD2O96028 1365 aa1.93□□□□□ -2.1
LMNB1-207ENST00000494185 AFF2P51816 1311 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 IGHV3-38A0A0C4DH36 116 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 A0A1B0GTH9 108 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 LRIT2A6NDA9 550 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 GLTPD2A6NH11 291 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 PCP4L1A6NKN8 68 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 CYSRT1A8MQ03 144 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 A8MU76 341 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 EPM2AB3EWF7 344 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 PDLIM1O00151 329 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 BTN3A3O00478 584 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ARPC3O15145 178 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 LCMT2O60294 686 aaKnown RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 SNAP91O60641 907 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 RHBDL1O75783 438 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ECDO95905 644 aaPredicted RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 MBD3O95983 291 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 TOP1P11387 765 aaKnown RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 CPN1P15169 458 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 H2AFXP16104 143 aaPredicted RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 HNF1AP20823 631 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 LMO2P25791 158 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 PPP2R1BP30154 601 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 GRIA1P42261 906 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 HTR5AP47898 357 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 AIF1P55008 147 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 DSCR10P59022 87 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ACTR3P61158 418 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 OSTNP61366 133 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ACY1Q03154 408 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 RBBP4Q09028 425 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 NCBP1Q09161 790 aaKnown RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 SLC17A1Q14916 467 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 MLF2Q15773 248 aaPredicted RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 CYBRD1Q53TN4 286 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 VWA2Q5GFL6 755 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 TMEM225Q6GV28 225 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 NEPROQ6NW34 567 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 BLOC1S2Q6QNY1 142 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 GCNT7Q6ZNI0 430 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 CCDC73Q6ZRK6 1079 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 TBC1D10CQ8IV04 446 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ABHD12Q8N2K0 398 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 FGFRL1Q8N441 504 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 TRPV1Q8NER1 839 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 OR1K1Q8NGR3 316 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 RHOXF1Q8NHV9 184 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 NANPQ8TBE9 248 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 DLX4Q92988 240 aaPredicted RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 FBXO32Q969P5 355 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 C11orf52Q96A22 123 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 NPY6RQ99463 290 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 TBC1D10AQ9BXI6 508 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 DHX33Q9H6R0 707 aaKnown RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 Q9HAA7 133 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 MEAF6Q9HAF1 191 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ELL3Q9HB65 397 aaPredicted RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 FAM120CQ9NX05 1096 aaKnown RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 HYPKQ9NX55 129 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 GHRLQ9UBU3 117 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 PTBP2Q9UKA9 531 aaKnown RBP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 CLEC4AQ9UMR7 237 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 RPH3ALQ9UNE2 315 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 NIP7Q9Y221 180 aaKnown RBP eCLIP1.92□□□□□ -2.1
LMNB1-207ENST00000494185 GSTK1Q9Y2Q3 226 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 DHRS7Q9Y394 339 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 TMED5Q9Y3A6 229 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 FKBP7Q9Y680 259 aa1.92□□□□□ -2.1
LMNB1-207ENST00000494185 ATP10DQ9P241 1426 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 IGLV3-10A0A075B6K4 115 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 TRAV26-1A0A087WT03 109 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 TRGV8A0A0C4DH27 118 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 ESYT2A0FGR8 921 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 FAM47DPA6NHR8 397 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 ZNF716A6NP11 495 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 ZNF724A8MTY0 619 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 E9PAM4 449 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 E9PBE3 544 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 H0YL77 283 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 CYB561D2O14569 222 aa1.91□□□□□ -2.1
LMNB1-207ENST00000494185 IMPA2O14732 288 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms