RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 SGSHP51688 502 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 RPS8P62241 208 aaKnown RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 CKAP4Q07065 602 aaKnown RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 IL18R1Q13478 541 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 EIF4EBP2Q13542 120 aaPredicted RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 MORF4L2Q15014 288 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 DCAF4L1Q3SXM0 396 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 CMPK2Q5EBM0 449 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 LGSNQ5TDP6 509 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 DPY19L2P2Q6ZN68 376 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 TOM1L2Q6ZVM7 507 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 ZNF410Q86VK4 478 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 RANBP3LQ86VV4 465 aaPredicted RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 CADM2Q8N3J6 435 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 SFRP1Q8N474 314 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 C14orf178Q8N769 122 aaPredicted RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 COLGALT1Q8NBJ5 622 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 PSMA8Q8TAA3 256 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 SETD7Q8WTS6 366 aaKnown RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 DNAJA3Q96EY1 480 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 C11orf24Q96F05 449 aaPredicted RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 C16orf74Q96GX8 76 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 ZNF285Q96NJ3 590 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 DEFB118Q96PH6 123 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 TECTBQ96PL2 329 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 DPH7Q9BTV6 452 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 TM2D1Q9BX74 207 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 KCNMB3Q9NPA1 279 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 STARD5Q9NSY2 213 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 NDUFA13Q9P0J0 144 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 MIOXQ9UGB7 285 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 ASXL1Q8IXJ9 1541 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 MIA2Q96PC5 1412 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 KIAA1107Q9UPP5 1409 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 SPAG9O60271 1321 aaKnown RBP2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 PLCH1Q4KWH8 1693 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 RREB1Q92766 1687 aa2.92□□□□□ -1.94
AC003001.1-201ENST00000443247 FYCO1Q9BQS8 1478 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 TMEM94Q12767 1356 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 LRIT2A6NDA9 550 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 RTN2O75298 545 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 NOL4O94818 638 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 BAG2O95816 211 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 PRB2P02812 416 aaPredicted RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 H2AFZP0C0S5 128 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 PSMB1P20618 241 aaKnown RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 ZP3P21754 424 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 PTBP1P26599 531 aaKnown RBP eCLIP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 MARCKSP29966 332 aaPredicted RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 CASP3P42574 277 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 OR3A4PP47883 348 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 CCL11P51671 97 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 WNT4P56705 351 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 RIPPLY3P57055 190 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 PUDPQ08623 228 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 C17orf67Q0P5P2 114 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 WSCD1Q658N2 575 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 CCDC91Q7Z6B0 441 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 IQCA1Q86XH1 822 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 TGIF2LYQ8IUE0 185 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 RSPH1Q8WYR4 309 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 DLX4Q92988 240 aaPredicted RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 TMEM45BQ96B21 275 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 IMMP1LQ96LU5 166 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 SDHCQ99643 169 aaPredicted RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 TSSK1BQ9BXA7 367 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 ZNF702PQ9H963 129 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 HPS4Q9NQG7 708 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 EXOSC3Q9NQT5 275 aaKnown RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 LHX3Q9UBR4 397 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 EHBP1L1Q8N3D4 1523 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 RGPD3A6NKT7 1758 aaPredicted RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 RGPD4Q7Z3J3 1758 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 RTEL1-TNFRSF6BF6WH68 1400 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 DCCP43146 1447 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 BLMP54132 1417 aaPredicted RBP2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 EEA1Q15075 1411 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 PTPRUQ92729 1446 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 ARHGEF5Q12774 1597 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 MAST1Q9Y2H9 1570 aa2.91□□□□□ -1.94
AC003001.1-201ENST00000443247 NUP188Q5SRE5 1749 aa2.9□□□□□ -1.94
AC003001.1-201ENST00000443247 ABCA3Q99758 1704 aa2.9□□□□□ -1.94
AC003001.1-201ENST00000443247 NCOA2Q15596 1464 aa2.9□□□□□ -1.94
AC003001.1-201ENST00000443247 RPRD2Q5VT52 1461 aaKnown RBP2.9□□□□□ -1.94
AC003001.1-201ENST00000443247 CCDC141Q6ZP82 1450 aa2.9□□□□□ -1.94
AC003001.1-201ENST00000443247 BCL9LQ86UU0 1499 aa2.9□□□□□ -1.94
AC003001.1-201ENST00000443247 TRPM2O94759 1503 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 CAMTA1Q9Y6Y1 1673 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 TRIM64A6NGJ6 449 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 TRIM64BA6NI03 449 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 TLR4O00206 839 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 NME2P1O60361 137 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 IGSF6O95976 241 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 PGK1P00558 417 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 SDC1P18827 310 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 TMOD1P28289 359 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 CNN1P51911 297 aaKnown RBP2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 ZNF133P52736 654 aaPredicted RBP2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 DIO3P55073 304 aa2.9□□□□□ -1.95
AC003001.1-201ENST00000443247 NOP14P78316 857 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms