RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PPP4R1LQ9P1A2 415 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 MGAT4CQ9UBM8 478 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 DKKL1Q9UK85 242 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 CYP17A1P05093 508 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 PROS1P07225 676 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 AHRP35869 848 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 ACTBP60709 375 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 ACTG1P63261 375 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 ACVR1Q04771 509 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 CCINQ13939 588 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF565Q8N9K5 539 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 RHOXF1Q8NHV9 184 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 LKAAEAR1Q8TD35 194 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 MRI1Q9BV20 369 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 MARCH5Q9NX47 278 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 UBQLN2Q9UHD9 624 aa16.12■□□□□ 0.17
TRAPPC11-201ENST00000334690 VSTM2BA6NLU5 285 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF888P0CJ79 500 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 PET100P0DJ07 73 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 MTHFD2P13995 350 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 NSDHLQ15738 373 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 MFSD6LQ8IWD5 586 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 RNF175Q8N4F7 328 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 CYB561A3Q8NBI2 242 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR6C4Q8NGE1 309 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 TREM1Q9NP99 234 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 GMPR2Q9P2T1 348 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 PPP1R3DO95685 299 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 PNMTP11086 282 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 HERV-K104P61576 105 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 TAP2Q03519 686 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 CNIH2Q6PI25 160 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZER1Q7Z7L7 766 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 EGFL6Q8IUX8 553 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 CCDC28AQ8IWP9 274 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 SNIP1Q8TAD8 396 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ELP5Q8TE02 316 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 MUL1Q969V5 352 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 TREX2Q9BQ50 279 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 EVA1AQ9H8M9 152 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 KLHL9Q9P2J3 617 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 PGAP2Q9UHJ9 254 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 POLR2IP36954 125 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 MLLT11Q13015 90 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 TUBB3Q13509 450 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ATXN7L3Q14CW9 347 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLC18B1Q6NT16 456 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 PODNL1Q6PEZ8 512 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLCO4C1Q6ZQN7 724 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 DTX3Q8N9I9 347 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ASB15Q8WXK1 588 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 KATNBL1Q9H079 304 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 KCNIP3Q9Y2W7 256 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 M0R129 80 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 NUDT7P0C024 238 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF84P51523 738 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 PLGLB1Q02325 96 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF91Q05481 1191 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 MAP4K2Q12851 820 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR13F1Q8NGS4 319 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 GGHQ92820 318 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 SLC22A12Q96S37 553 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 MEPEQ9NQ76 525 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 NUP50Q9UKX7 468 aa16.11■□□□□ 0.17
TRAPPC11-201ENST00000334690 KIR2DS5A0A0G2JLQ3 304 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 A0A0G2JNG1 304 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 KIR2DS3K7RE56 304 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 DRD1P21728 446 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 CTBP2P56545 445 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 KIR2DS5Q14953 304 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 SMN1Q16637 294 aaKnown RBP16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 C6orf132Q5T0Z8 1188 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 OR5J2Q8NH18 312 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 TRMT10AQ8TBZ6 339 aaKnown RBP16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 FGF13Q92913 245 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 C1QTNF2Q9BXJ5 285 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 ALOXE3Q9BYJ1 711 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 COL22A1Q8NFW1 1626 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 A0A1B0GVC2 190 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 ZNF217O75362 1048 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 TOXO94900 526 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 CA3P07451 260 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 GRPRP30550 384 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 DUSP3P51452 185 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 RNASE10Q5GAN6 216 aaKnown RBP16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 ADAMTS16Q8TE57 1224 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 LPAR4Q99677 370 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 KIAA0355O15063 1070 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 PITPNBP48739 271 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 SYPL1Q16563 259 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 DGLUCYQ7Z3D6 616 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 POGLUT1Q8NBL1 392 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 TUBB1Q9H4B7 451 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 SUSD2Q9UGT4 822 aa16.1■□□□□ 0.17
TRAPPC11-201ENST00000334690 IL1AP01583 271 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 GPX2P18283 190 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 AGTR1P30556 359 aa16.09■□□□□ 0.17
TRAPPC11-201ENST00000334690 GRK5P34947 590 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms