RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FBXO34Q9NWN3 711 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CMTM6Q9NX76 183 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CALML5Q9NZT1 146 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
VPS25-201ENST00000253794 TMEM181Q9P2C4 612 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CNOT11Q9UKZ1 510 aaKnown RBP12.96□□□□□ -0.33
VPS25-201ENST00000253794 TNRC6AQ8NDV7 1962 aaKnown RBP12.96□□□□□ -0.34
VPS25-201ENST00000253794 KIAA0513O60268 411 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 FADS1O60427 444 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 HNRNPCL1O60812 293 aaKnown RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 DNAJA2O60884 412 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 STX11O75558 287 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 ZIC2O95409 532 aaPredicted RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 NUDT7P0C024 238 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 TBXA2RP21731 343 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 PSME3P61289 254 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 OC90Q02509 493 aaPredicted RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 BNIP1Q12981 228 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 ZNF630Q2M218 657 aaPredicted RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 SPATS1Q496A3 300 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 TBCELQ5QJ74 424 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 SPINK14Q6IE38 97 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 TYW3Q6IPR3 259 aaKnown RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 SLC25A25Q6KCM7 469 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 RPUSD3Q6P087 351 aaKnown RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 C16orf89Q6UX73 402 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 FRRS1Q6ZNA5 592 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 MDGA2Q7Z553 956 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 ZAR1Q86SH2 424 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 FBXO27Q8NI29 283 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 REXO5Q96IC2 774 aaKnown RBP12.95□□□□□ -0.34
VPS25-201ENST00000253794 ZNF583Q96ND8 569 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 ANGPTL4Q9BY76 406 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 TRIM8Q9BZR9 551 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 HOXD1Q9GZZ0 328 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 SLC38A1Q9H2H9 487 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 UBQLN4Q9NRR5 601 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 ANKRD10Q9NXR5 420 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 CSAG2Q9Y5P2 127 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 CACNA1BQ00975 2339 aa12.95□□□□□ -0.34
VPS25-201ENST00000253794 CNTRLQ7Z7A1 2325 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 A0A1W2PQD3 144 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 TMEM247A6NEH6 219 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ALG1L2C9J202 215 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 NME4O00746 187 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ATXN7O15265 892 aaPredicted RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 HS6ST1O60243 411 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 FCMRO60667 390 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ICOSLGO75144 302 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 UTS2O95399 124 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 H6PDO95479 791 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SP1P08047 785 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CHRM4P08173 479 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CCL3P10147 92 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CD46P15529 392 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ATP6V1C1P21283 382 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 RPS4Y1P22090 263 aaKnown RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 PTGDSP41222 190 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CASP3P42574 277 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SLC7A2P52569 658 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CRISP3P54108 245 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 GAS1P54826 345 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 EEFSECP57772 596 aaKnown RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 VEZF1Q14119 521 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ZNF169Q14929 603 aaPredicted RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 ZNF141Q15928 474 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SYPL1Q16563 259 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CCNJQ5T5M9 372 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SLC22A10Q63ZE4 541 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 FIGNL1Q6PIW4 674 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 BNC2Q6ZN30 1099 aaPredicted RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 SLC30A8Q8IWU4 369 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ZZZ3Q8IYH5 903 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ZNF619Q8N2I2 560 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ANKFN1Q8N957 763 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 POGLUT1Q8NBL1 392 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 TMEM178AQ8NBL3 297 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 RBM15BQ8NDT2 890 aaKnown RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 OR10A6Q8NH74 314 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 GRHL3Q8TE85 626 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 PNPLA2Q96AD5 504 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 TMEM19Q96HH6 336 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 NODALQ96S42 347 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 ECSITQ9BQ95 431 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.94□□□□□ -0.34
VPS25-201ENST00000253794 RUBCNLQ9H714 662 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 PROK2Q9HC23 129 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 HHATLQ9HCP6 504 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SACM1LQ9NTJ5 587 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SUCOQ9UBS9 1254 aaKnown RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 B3GNT3Q9Y2A9 372 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 KLF13Q9Y2Y9 288 aaPredicted RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 WDR45Q9Y484 360 aa12.94□□□□□ -0.34
VPS25-201ENST00000253794 SPENQ96T58 3664 aaKnown RBP12.94□□□□□ -0.34
VPS25-201ENST00000253794 ATRXP46100 2492 aa12.93□□□□□ -0.34
VPS25-201ENST00000253794 A0A0G2JPF8 293 aa12.93□□□□□ -0.34
VPS25-201ENST00000253794 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
VPS25-201ENST00000253794 FAM220BPB1ANY3 271 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms