RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Akr1d1Q8VCX1 325 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr161Q8VGB9 313 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr1378Q8VGH0 315 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 Oas3Q8VI93 1138 aaKnown RBP13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 Slc22a30Q96LX3 552 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 St7Q99M96 577 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr44Q9EQB8 314 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 B4galt2Q9Z2Y2 369 aa13.83□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr1032A2ATE5 310 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rad21l1A2AU37 552 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc10a1O08705 362 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 MyogP12979 224 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tuba4aP68368 448 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 BmxP97504 651 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rspo3Q2TJ95 277 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Xrra1Q3U3V8 786 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Q3U6N9 222 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Nhlrc4Q3UP44 136 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ms4a15Q3UPL6 245 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ttf1Q62187 859 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gm5416Q6IE28 97 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr835Q7TRG7 311 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Crls1Q80ZM8 303 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Hist1h2aaQ8CGP4 129 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr1250Q8VGM3 314 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc3a1Q91WV7 685 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Mgat2Q921V5 442 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Lims1Q99JW4 325 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Dctn2Q99KJ8 402 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Plod2Q9R0B9 737 aa13.83□□□□□ -0.2
Nup88-202ENSMUST00000108530 Mamdc4A2AJA7 1228 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 6330409D20RikA2AK85 162 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Scarb2O35114 478 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rrm2P11157 390 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Hoxa2P31245 372 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Eci1P42125 289 aaKnown RBP13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gm1123Q1RME4 390 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 RogdiQ3TDK6 287 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 CrxosQ3UL53 246 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Angptl1Q640P2 490 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Prrg3Q6PAQ9 231 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tas2r140Q7TQA4 312 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr1308Q7TQX0 320 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc25a24Q8BMD8 475 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Scara5Q8K299 491 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc38a4Q8R1S9 547 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Atp6v1g1Q9CR51 118 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 NarfQ9CYQ7 462 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Adad2Q9D5P4 478 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Dnase1l1Q9D7J6 314 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 PaplnQ9EPX2 1280 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 B3galt5Q9JI67 308 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Acot2Q9QYR9 453 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 HnrnpdlQ9Z130 301 aaKnown RBP13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Wnk2Q3UH66 2149 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gm37596A0A0A6YXL2 336 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Olfr396-ps1A0A0U1RNF5 211 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gm13723A0A1L1SUP2 315 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 G430095P16RikE9Q913 147 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gm28048F7BCN0 99 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Zfp619G3X9T2 1161 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Man2a1P27046 1150 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Hdac2P70288 488 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Csn1s2aQ02862 184 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Sox14Q04892 240 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gpat2Q14DK4 801 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Trav8d-2Q5R1B6 112 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc30a1Q60738 503 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ckmt2Q6P8J7 419 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Sox11Q7M6Y2 395 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Ip6k3Q8BWD2 396 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rae1Q8C570 368 aaKnown RBP13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Nt5dc1Q8C5P5 467 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Alkbh3Q8K1E6 286 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Lin28aQ8K3Y3 209 aaKnown RBP13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tmem185bQ8R3R5 350 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Mospd1Q8VEL0 213 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Tnfaip8Q921Z5 198 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Pcbd2Q9CZL5 136 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 H2bfmQ9DAB5 224 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 LipgQ9WVG5 500 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Kcnd3Q9Z0V1 655 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Mocs2Q9Z223 189 aa13.82□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rex2A2AWF2 685 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Klhl4B1AZR0 717 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Zfp605E9QAH2 694 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Susd5G3UW60 619 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Syt3O35681 587 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Phox2bO35690 314 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Cdh2P15116 906 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 TtlP38585 377 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 EpxP49290 716 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Slc9a3r1P70441 355 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Rgs14P97492 547 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Teddm2Q208S0 260 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 ManeaQ6NXH2 462 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Scn3bQ8BHK2 215 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Cox15Q8BJ03 413 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 Gen1Q8BMI4 908 aa13.81□□□□□ -0.2
Nup88-202ENSMUST00000108530 BicralQ8CHH5 1074 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms