RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CYP51A1Q16850 503 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 ARHGAP11BQ3KRB8 267 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 SPATS1Q496A3 300 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 SLC34A3Q8N130 599 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 FAM110BQ8TC76 370 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 RMND5BQ96G75 393 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 LRMDAQ9H2I8 198 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 ADA2Q9NZK5 511 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 P2RX2Q9UBL9 471 aa18.29■□□□□ 0.52
PDLIM2-221ENST00000622702 CDK2AP1O14519 115 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 KCNK2O95069 426 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 TFPTP0C1Z6 253 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 ARAFP10398 606 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 DECR1Q16698 335 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 SAMD4BQ5PRF9 694 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 DCST2Q5T1A1 773 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 AGAP7PQ5VUJ5 663 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 LYPD8Q6UX82 237 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 ASB18Q6ZVZ8 466 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 C16orf62Q7Z3J2 963 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 PTOV1Q86YD1 416 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 METTL25Q8N6Q8 603 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 BCORP1Q8N888 145 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 SLC38A5Q8WUX1 472 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 REXO5Q96IC2 774 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 AGAP4Q96P64 663 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 TRNT1Q96Q11 434 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 LMF1Q96S06 567 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 SDF2Q99470 211 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 ALG2Q9H553 416 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF552Q9H707 407 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 MRTO4Q9UKD2 239 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 NPFFR2Q9Y5X5 522 aa18.28■□□□□ 0.52
PDLIM2-221ENST00000622702 PRORSD1PA6NEY8 169 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 FAM220BPB1ANY3 271 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 GUSBP08236 651 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 GSK3BP49841 420 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 SSR4P51571 173 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 PLCXD2Q0VAA5 305 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 NFATC3Q12968 1075 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 MAPK11Q15759 364 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF630Q2M218 657 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 ABHD17BQ5VST6 288 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 AP1ARQ63HQ0 302 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 ERICH5Q6P6B1 374 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 ISLR2Q6UXK2 745 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 ZZZ3Q8IYH5 903 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 C11orf65Q8NCR3 313 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 OR2T12Q8NG77 320 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 MAL2Q969L2 176 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 TMBIM1Q969X1 311 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 OMA1Q96E52 524 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 CD300AQ9UGN4 299 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 ZNF451Q9Y4E5 1061 aa18.27■□□□□ 0.52
PDLIM2-221ENST00000622702 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 TSPAN2O60636 221 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 IL33O95760 270 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 IGKV1D-16P01601 117 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ALPPP05187 535 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 FBXO45P0C2W1 286 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 NR2F1P10589 423 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 HSD17B1P14061 328 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 TMED10P49755 219 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PSMD4P55036 377 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 CDK6Q00534 326 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 GNA13Q14344 377 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 SYPL1Q16563 259 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 VMACQ2NL98 169 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PRAMEF8Q5VWM4 474 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PRAMEF7Q5VXH5 474 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 OPN5Q6U736 354 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ASRGL1Q7L266 308 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PTRH1Q86Y79 214 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 DND1Q8IYX4 353 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PRR22Q8IZ63 422 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ANKFN1Q8N957 763 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 DIO2Q92813 273 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 SMAD5Q99717 465 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 G6PC3Q9BUM1 346 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ZNF350Q9GZX5 532 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PIF1Q9H611 641 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 POLE3Q9NRF9 147 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 STMN3Q9NZ72 180 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PCDHGB7Q9Y5F8 929 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 CPAMD8Q8IZJ3 1885 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 OR6C70A6NIJ9 312 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ABCB7O75027 752 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 STX11O75558 287 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 PPM1BO75688 479 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 DNAJC8O75937 253 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 C1QL1O75973 258 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 BCHEP06276 602 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 LCN1P31025 176 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 KRT20P35900 424 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 SOX3P41225 446 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 CEACAM7Q14002 265 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 CCNJQ5T5M9 372 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 FIGNL1Q6PIW4 674 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 LRRC74BQ6ZQY2 392 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 301.6 ms