RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MAGOHP61326 146 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 BST1Q10588 318 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 TOMM20Q15388 145 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 ZNHIT3Q15649 155 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 DECR1Q16698 335 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 SMU1Q2TAY7 513 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 NHSL2Q5HYW2 709 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 WIPI1Q5MNZ9 446 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 HHATQ5VTY9 493 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 B3GNT6Q6ZMB0 384 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 ACAD11Q709F0 780 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 YRDCQ86U90 279 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 PLCZ1Q86YW0 608 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 CCDC71Q8IV32 467 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 ULK2Q8IYT8 1036 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 LILRB4Q8NHJ6 448 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 CEP70Q8NHQ1 597 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 CA5BP1Q8WTZ4 195 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 ALKBH4Q9NXW9 302 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 ASIC5Q9NY37 505 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 FBXL2Q9UKC9 423 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 DCHS2Q6V1P9 2916 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 A0A1W2PRB8 838 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 TTC36A6NLP5 189 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 C17orf51A8MQB3 221 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 HNRNPRO43390 633 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 EMC8O43402 210 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 NKX2-2O95096 273 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 IGKV1D-16P01601 117 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 GABRA1P14867 456 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 BMP7P18075 431 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 PRPS1L1P21108 318 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 CHRNB4P30926 498 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 EVI2BP34910 448 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 RPL3P39023 403 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 KIR3DL1P43629 444 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 SLC18A1P54219 525 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 C21orf58P58505 322 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 MRPS22P82650 360 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 MAD2L1Q13257 205 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 EXOSC6Q5RKV6 272 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 DCST1Q5T197 706 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 C1orf185Q5T7R7 199 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 CPTPQ5TA50 214 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 OR5M10Q6IEU7 315 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 PIK3R3Q92569 461 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 MARVELD3Q96A59 401 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 UGT2B28Q9BY64 529 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 RTN4RQ9BZR6 473 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 C3orf14Q9HBI5 128 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 PNPOQ9NVS9 261 aa16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 EIF3LQ9Y262 564 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-202ENST00000593764 ACP2P11117 423 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 PRF1P14222 555 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 DDX5P17844 614 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 ADH7P40394 386 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 DIO3P55073 304 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 CLDN8P56748 225 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 CASP8Q14790 479 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 MFSD12Q6NUT3 480 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 SEM1Q6ZVN7 128 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 CDRT4Q8N9R6 151 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 SLC16A11Q8NCK7 471 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 PSMA8Q8TAA3 256 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 ASB5Q8WWX0 329 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 FAM120BQ96EK7 910 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 C16orf58Q96GQ5 468 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 WDYHV1Q96HA8 205 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 MS4A4EQ96PG1 132 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 OR2B2Q9GZK3 357 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 PRDM14Q9GZV8 571 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 NOP53Q9NZM5 478 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 FBN2P35556 2912 aa16.82■□□□□ 0.28
SHKBP1-202ENST00000593764 PCNX3Q9H6A9 2034 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 A0A0G2JNJ9 132 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 AHRRA9YTQ3 701 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 KDM4EB2RXH2 506 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 ZIC3O60481 467 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 PTGER4P35408 488 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 CAMKMTQ7Z624 323 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 NATD1Q8N6N6 113 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 ACBD4Q8NC06 268 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 OR10Q1Q8NGQ4 319 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 FAM110BQ8TC76 370 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 MGARPQ8TDB4 240 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 GPR151Q8TDV0 419 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 OR5P2Q8WZ92 322 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 SLC9A6Q92581 669 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 ABTB1Q969K4 478 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 RMND5BQ96G75 393 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 PRPF18Q99633 342 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 NUF2Q9BZD4 464 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 UCK2Q9BZX2 261 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 CXorf36Q9H7Y0 433 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 MEAF6Q9HAF1 191 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 ATAD3AQ9NVI7 634 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 Q9UFV3 132 aa16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 MRTO4Q9UKD2 239 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-202ENST00000593764 ABCG2Q9UNQ0 655 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms