RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 GTPBP1O00178 669 aaKnown RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 SLC43A1O75387 559 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 C1orf105O95561 183 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TFP02787 698 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3HP0C7X1 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SHC1P29353 583 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TEAD2Q15562 447 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 CCDC157Q569K6 752 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 C3orf38Q5JPI3 329 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TMEM69Q5SWH9 247 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 HES5Q5TA89 166 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3GQ6DHY5 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ALG1LQ6GMV1 187 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3CQ6IPX1 549 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 RTN4RL1Q86UN2 441 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 GPALPP1Q8IXQ4 340 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TBC1D3Q8IZP1 549 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 TTLQ8NG68 377 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 OR8S1Q8NH09 359 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 OR5W2Q8NH69 310 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 DEFB118Q96PH6 123 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 NDUFB11Q9NX14 153 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 NUP50Q9UKX7 468 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 CCL27Q9Y4X3 112 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 OR14I1A6ND48 311 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 UNC119BA6NIH7 251 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 A8MUA0 341 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 GATBO75879 557 aaKnown RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 ENDOUP21128 410 aaKnown RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 CBLP22681 906 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ETV6P41212 452 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 LRRC28Q86X40 367 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 FCAMRQ8WWV6 532 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.92□□□□□ -0.82
USB1-212ENST00000566082 METTL17Q9H7H0 456 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 C1GALT1Q9NS00 363 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SPATA6Q9NWH7 488 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 TEX10Q9NXF1 929 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 CLEC4EQ9ULY5 219 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SLC6A14Q9UN76 642 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ASB4Q9Y574 426 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 LRRC37AA6NMS7 1700 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TRBV5-3A0A0A0MS03 114 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SLC22A31A6NKX4 558 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 H3BQ06 376 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 CREBL2O60519 120 aaPredicted RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 SCN2BO60939 215 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 HRGP04196 525 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ASGR2P07307 311 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ITPKBP27987 946 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 PSMB5P28074 263 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 WNT3P56703 355 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SNRPGP62308 76 aaKnown RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 ZNF234Q14588 700 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 MINDY4Q4G0A6 757 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TP53I3Q53FA7 332 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 TCTN3Q6NUS6 607 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 LYPD4Q6UWN0 246 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 VRK2Q86Y07 508 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 CHST4Q8NCG5 386 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SETD7Q8WTS6 366 aaKnown RBP9.92□□□□□ -0.82
USB1-212ENST00000566082 ASB12Q8WXK4 309 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 SLC41A3Q96GZ6 507 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 MAP6Q96JE9 813 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ZSWIM3Q96MP5 696 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ACTR6Q9GZN1 396 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 CWH43Q9H720 699 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 EXO5Q9H790 373 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 STON1Q9Y6Q2 735 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 ARID1AO14497 2285 aa9.92□□□□□ -0.82
USB1-212ENST00000566082 B8ZZF3 427 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 PSMD9O00233 223 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 CACNB4O00305 520 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 EMC8O43402 210 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 CYBAP13498 195 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 HSD17B2P37059 387 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ADH7P40394 386 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 MC3RP41968 323 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SRP9P49458 86 aaKnown RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 ELOAQ14241 798 aaKnown RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 ACSM3Q53FZ2 586 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 PAQR7Q86WK9 346 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 CLSTN3Q9BQT9 956 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 CUEDC1Q9NWM3 386 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 BABAM2Q9NXR7 383 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 COPZ2Q9P299 210 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 TMEM5Q9Y2B1 443 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 NUBP2Q9Y5Y2 271 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 MN1Q10571 1320 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 SSC5DA1L4H1 1573 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ELOA3DA6NLF2 546 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 ARPC1BO15143 372 aaKnown RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 LATS1O95835 1130 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 FABP5Q01469 135 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 IFITM2Q01629 132 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 PUDPQ08623 228 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 BCL2A1Q16548 175 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ELOA3BQ3SY89 546 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SCGB2B2Q4G0G5 96 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms