RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-215	ENST00000558868	AGAP5	A6NIR3	686 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	FAAH	O00519	579 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	KIAA0513	O60268	411 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	BRINP1	O60477	761 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	FCMR	O60667	390 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	UGT2B17	O75795	530 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	CYC1	P08574	325 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	FGF5	P12034	268 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	IL7R	P16871	459 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	SSTR4	P31391	388 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	RORA	P35398	523 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	YAP1	P46937	504 aa	Known RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	LIMS1	P48059	325 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	PSMD4	P55036	377 aa	Known RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	DCD	P81605	110 aa	Known RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	ZFP36L1	Q07352	338 aa	Known RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	KCNAB2	Q13303	367 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	GPR68	Q15743	365 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	EXOC3L2	Q2M3D2	409 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	NKAIN1	Q4KMZ8	207 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	PRAMEF17	Q5VTA0	474 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	TCEAL6	Q6IPX3	200 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	TTC33	Q6PID6	262 aa	Predicted RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	SETD9	Q8NE22	299 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	OIT3	Q8WWZ8	545 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	PIK3R3	Q92569	461 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	TCEAL3	Q969E4	200 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	RMND5B	Q96G75	393 aa	Predicted RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	FBXL20	Q96IG2	436 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	PRRC1	Q96M27	445 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	VSTM2L	Q96N03	204 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	SLC46A1	Q96NT5	459 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	ALPK1	Q96QP1	1244 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	MBOAT4	Q96T53	435 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	FNDC11	Q9BVV2	318 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	NMNAT1	Q9HAN9	279 aa	Predicted RBP	12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	MKLN1	Q9UL63	735 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	POFUT2	Q9Y2G5	429 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868		R4GN57	208 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	ASXL3	Q9C0F0	2248 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	SCN2A	Q99250	2005 aa		12.81	□□□□□ -0.36
TPM1-215	ENST00000558868	LOC100130705	A0A1B0GUX0	176 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868		A0A1W2PRQ8	180 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	LNP1	A1A4G5	178 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	EFCAB7	A8K855	629 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	TMX2-CTNND1	H3BSU7	103 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868		J3KTA2	159 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868		M0R3H8	397 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	AP3D1	O14617	1153 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	HYAL3	O43820	417 aa	Predicted RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	KCNK2	O95069	426 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	CCNYL3	P0C7X3	344 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	ZNF806	P0C7X5	589 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	AGXT	P21549	392 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	RPS4Y1	P22090	263 aa	Known RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	DCAF7	P61962	342 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	MYBPC1	Q00872	1141 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	IL1RL1	Q01638	556 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	DGCR6	Q14129	220 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	GANAB	Q14697	944 aa	Known RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	NSDHL	Q15738	373 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	DCST1	Q5T197	706 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	RNF220	Q5VTB9	566 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	OLIG3	Q7RTU3	272 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	VRK2	Q86Y07	508 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	APLF	Q8IW19	511 aa	Predicted RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	ZNF615	Q8N8J6	731 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	TOR1AIP2	Q8NFQ8	470 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	OR52J3	Q8NH60	311 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	SENP5	Q96HI0	755 aa	Predicted RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	BARD1	Q99728	777 aa	Known RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	ANKRD19P	Q9H560	264 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	MRTO4	Q9UKD2	239 aa	Known RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	MKL2	Q9ULH7	1088 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	MGAT4B	Q9UQ53	548 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	HSPE1-MOB4	S4R3N1	261 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	COL5A1	P20908	1838 aa	Predicted RBP	12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	NUP210L	Q5VU65	1888 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	NCOR2	Q9Y618	2525 aa		12.8	□□□□□ -0.36
TPM1-215	ENST00000558868	SPTB	P11277	2137 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	GXYLT2	A0PJZ3	443 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	FFAR1	O14842	300 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	POLR1C	O15160	346 aa	Predicted RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	CPNE3	O75131	537 aa	Known RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	NME6	O75414	186 aa	Predicted RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	ZIC2	O95409	532 aa	Predicted RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	NID1	P14543	1247 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	GTF2A1	P52655	376 aa	Predicted RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	RGS8	P57771	180 aa	Predicted RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	EEF1A1	P68104	462 aa	Known RBP	12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	PSPH	P78330	225 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	PSG6	Q00889	435 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	MC2R	Q01718	297 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	TCF15	Q12870	199 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	KEAP1	Q14145	624 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	LAPTM4A	Q15012	233 aa		12.79	□□□□□ -0.36
TPM1-215	ENST00000558868	KCTD21	Q4G0X4	260 aa		12.79	□□□□□ -0.36

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