RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 OR14L1PQ8NHC6 308 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 ADAMTS15Q8TE58 950 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 CDS1Q92903 461 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 SARAFQ96BY9 339 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 SH3GL2Q99962 352 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 LMF2Q9BU23 707 aaKnown RBP10.1□□□□□ -0.79
DDB1-222ENST00000543627 ZNF703Q9H7S9 590 aaPredicted RBP10.1□□□□□ -0.79
DDB1-222ENST00000543627 ZDHHC11Q9H8X9 412 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 SLCO1B3Q9NPD5 702 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 RYDENQ9NUL5 291 aaKnown RBP10.1□□□□□ -0.79
DDB1-222ENST00000543627 GIN1Q9NXP7 522 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 PPP4R1LQ9P1A2 415 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 PLEKHB1Q9UF11 243 aaPredicted RBP10.1□□□□□ -0.79
DDB1-222ENST00000543627 HAO1Q9UJM8 370 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 DKKL1Q9UK85 242 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 CAMK2AQ9UQM7 478 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 RPH3AQ9Y2J0 694 aaPredicted RBP10.1□□□□□ -0.79
DDB1-222ENST00000543627 ZNF835Q9Y2P0 537 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 MEMO1Q9Y316 297 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 DOPEY2Q9Y3R5 2298 aa10.1□□□□□ -0.79
DDB1-222ENST00000543627 GTF3C1Q12789 2109 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 UQCRHLA0A096LP55 91 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 C17orf51A8MQB3 221 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 UTS2O95399 124 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 IL33O95760 270 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 ALDOCP09972 364 aaKnown RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 MATN1P21941 496 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 EVI2BP34910 448 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 PTGDSP41222 190 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 FRKP42685 505 aaPredicted RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 SMSP52788 366 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 CLNS1AP54105 237 aaKnown RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 RPS26P62854 115 aaKnown RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 HBA1P69905 142 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 POU6F2P78424 691 aaPredicted RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 SRYQ05066 204 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 PMPCAQ10713 525 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDB1-222ENST00000543627 MLC1Q15049 377 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 HYAL4Q2M3T9 481 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 FAM174BQ3ZCQ3 159 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 SPANXN4Q5MJ08 99 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 MFSD12Q6NUT3 480 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 MTFR2Q6P444 385 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 ACAD11Q709F0 780 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 MARCH3Q86UD3 253 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 CHERPQ8IWX8 916 aaKnown RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 EID3Q8N140 333 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 OR56A1Q8NGH5 318 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 DUSP19Q8WTR2 217 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 SLC35A4Q96G79 324 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 ZNF764Q96H86 408 aaPredicted RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 TMEM41AQ96HV5 264 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 TEX37Q96LM6 180 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 OR52B2Q96RD2 323 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 TBL1XR1Q9BZK7 514 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 DSN1Q9H410 356 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 SIRT3Q9NTG7 399 aaPredicted RBP10.09□□□□□ -0.79
DDB1-222ENST00000543627 AIG1Q9NVV5 245 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 ASIC5Q9NY37 505 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 MED11Q9P086 117 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 SPRR3Q9UBC9 169 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 C15orf41Q9Y2V0 281 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 HRH3Q9Y5N1 445 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 USH1CQ9Y6N9 552 aa10.09□□□□□ -0.79
DDB1-222ENST00000543627 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 NPIPA5A0A0B4J1W7 369 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 RNF103-CHMP3A0A140T963 221 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 PRSS44E7EML9 344 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 NPIPA7E9PJI5 369 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 AQP7O14520 342 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 BCKDKO14874 412 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 KLF11O14901 512 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 SNPHO15079 494 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 UBDO15205 165 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 SUSD5O60279 629 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 HCN1O60741 890 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 CBR3O75828 277 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 NKX2-2O95096 273 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 CLDN1O95832 211 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 IGKV1D-16P01601 117 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 IGHG3P01860 377 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 NPIPA8P0DM63 369 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 ATP6V1C1P21283 382 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 ELAVL4P26378 380 aaKnown RBP10.08□□□□□ -0.8
DDB1-222ENST00000543627 PTPN6P29350 595 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 GCKP35557 465 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 CHI3L1P36222 383 aaPredicted RBP10.08□□□□□ -0.8
DDB1-222ENST00000543627 PSPHP78330 225 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 SNTA1Q13424 505 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 GRAMD1BQ3KR37 738 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 ANXA8L1Q5VT79 327 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 FNDC7Q5VTL7 733 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 BHLHB9Q6PI77 547 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 Q6ZPB1 254 aaPredicted RBP10.08□□□□□ -0.8
DDB1-222ENST00000543627 ZNF621Q6ZSS3 439 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 MAVSQ7Z434 540 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 C6orf120Q7Z4R8 191 aa10.08□□□□□ -0.8
DDB1-222ENST00000543627 PLCZ1Q86YW0 608 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms