RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 HPS6Q86YV9 775 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 DIO2Q92813 273 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 NSL1Q96IY1 281 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 UBL7Q96S82 380 aaPredicted RBP13.77□□□□□ -0.21
NUP54-213ENST00000513352 SH3GL1Q99961 368 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 G6PC3Q9BUM1 346 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 SLC25A18Q9H1K4 315 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 PIEZO2Q9H5I5 2752 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 IKZF5Q9H5V7 419 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 METTL7AQ9H8H3 244 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
NUP54-213ENST00000513352 LUZP4Q9P127 313 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 LAMA5O15230 3695 aa13.77□□□□□ -0.21
NUP54-213ENST00000513352 TRAV17A0A0B4J275 112 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 OR6C70A6NIJ9 312 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 G3V3Y1 287 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 FXYD1O00168 92 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 TSPAN2O60636 221 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 ICOSLGO75144 302 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 BCHEP06276 602 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 CCL3P10147 92 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 CYP4B1P13584 511 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 NAGAP17050 411 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 MAGEA8P43361 318 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 TNFSF10P50591 281 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 MNAT1P51948 309 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 MVDP53602 400 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 RABL3Q5HYI8 236 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 COLEC12Q5KU26 742 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 SLC22A10Q63ZE4 541 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 NANOGP8Q6NSW7 305 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 IGFL3Q6UXB1 125 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 NUP54Q7Z3B4 507 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 MDGA2Q7Z553 956 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 PTRH1Q86Y79 214 aaKnown RBP13.76□□□□□ -0.21
NUP54-213ENST00000513352 RBMXL3Q8N7X1 1067 aaKnown RBP13.76□□□□□ -0.21
NUP54-213ENST00000513352 TEX19Q8NA77 164 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 GOLM1Q8NBJ4 401 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 MDS2Q8NDY4 140 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 TMCO6Q96DC7 493 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 SGCZQ96LD1 299 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 ECSITQ9BQ95 431 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 HES7Q9BYE0 225 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 PIF1Q9H611 641 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 NANOGQ9H9S0 305 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 SACM1LQ9NTJ5 587 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 FBXO34Q9NWN3 711 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 THUMPD1Q9NXG2 353 aaKnown RBP13.76□□□□□ -0.21
NUP54-213ENST00000513352 KLRF1Q9NZS2 232 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 L3MBTL1Q9Y468 752 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 ITPR1Q14643 2758 aa13.76□□□□□ -0.21
NUP54-213ENST00000513352 ATMQ13315 3056 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 C15orf38-AP3S2A0A0A6YYH1 394 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NPIPA5A0A0B4J1W7 369 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 PRAMEF25A6NGN4 478 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 CCT8L1PA6NM43 557 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NPIPA7E9PJI5 369 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 CDK2AP1O14519 115 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 STX11O75558 287 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NEURL1O76050 574 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 UBOX5O94941 541 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 UTS2O95399 124 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 SP1P08047 785 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NUDT7P0C024 238 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NPIPA8P0DM63 369 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 HPGDP15428 266 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 PNLIPRP2P54317 469 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 GPR85P60893 370 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 ZNF169Q14929 603 aaPredicted RBP13.75□□□□□ -0.21
NUP54-213ENST00000513352 GPR68Q15743 365 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 SYPL1Q16563 259 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 ARHGAP11BQ3KRB8 267 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NADK2Q4G0N4 442 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 FLYWCH1Q4VC44 716 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 SLC6A19Q695T7 634 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 SLC25A25Q6KCM7 469 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 HACD2Q6Y1H2 254 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 ARPINQ7Z6K5 226 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 ZAR1Q86SH2 424 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 ZNF614Q8N883 585 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 ANKFN1Q8N957 763 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 CHDHQ8NE62 594 aaPredicted RBP13.75□□□□□ -0.21
NUP54-213ENST00000513352 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 OR10A6Q8NH74 314 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 SPPL2AQ8TCT8 520 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 HGDQ93099 445 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 WBP1Q96G27 269 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 NODALQ96S42 347 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 SDF2Q99470 211 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 TRIM45Q9H8W5 580 aaPredicted RBP13.75□□□□□ -0.21
NUP54-213ENST00000513352 LIPT1Q9Y234 373 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 B3GNT3Q9Y2A9 372 aa13.75□□□□□ -0.21
NUP54-213ENST00000513352 KLF13Q9Y2Y9 288 aaPredicted RBP13.75□□□□□ -0.21
NUP54-213ENST00000513352 WDR45Q9Y484 360 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms