RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 MLPHQ9BV36 600 aaPredicted RBP3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 FICDQ9BVA6 458 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLC39A8Q9C0K1 460 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ARRDC1-AS1Q9H2J1 176 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 FAM96AQ9H5X1 160 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ECT2Q9H8V3 914 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 NMUR1Q9HB89 426 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 MRM3Q9HC36 420 aaKnown RBP3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLC35C2Q9NQQ7 365 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 IL37Q9NZH6 218 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLC17A7Q9P2U7 560 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 EXTL2Q9UBQ6 330 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 DCDC2Q9UHG0 476 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 OSGIN1Q9UJX0 560 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 RPS6KA6Q9UK32 745 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 PLLPQ9Y342 182 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 HBS1LQ9Y450 684 aaKnown RBP3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ZFP37Q9Y6Q3 630 aaPredicted RBP3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 COL4A6Q14031 1691 aa3.55□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 HELZP42694 1942 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 UTRNP46939 3433 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 IGLV3-10A0A075B6K4 115 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ARPC4-TTLL3A0A0A6YYG9 625 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 HEATR9A2RTY3 570 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 HYKKA2RU49 373 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 F5H5T6 163 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ADAM20O43506 726 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 UGT1A9O60656 530 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ERAL1O75616 437 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 NADKO95544 446 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 IGLV3-27P01718 113 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 CXCL10P02778 98 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 BPGMP07738 259 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 NQO1P15559 274 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 DNASE1P24855 282 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 DNAJB1P25685 340 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ITGA3P26006 1051 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ALDH4A1P30038 563 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 CEACAM8P31997 349 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 MAGEA12P43365 314 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 TUFMP49411 452 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 KPNA2P52292 529 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 YBEYP58557 167 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 NCALDP61601 193 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 CX3CL1P78423 397 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 IL10RBQ08334 325 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 DMPKQ09013 629 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 TAF10Q12962 218 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 BNIP1Q12981 228 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 STX3Q13277 289 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 HNRNPDQ14103 355 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ZNF235Q14590 738 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 CHI3L2Q15782 390 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SNCBQ16143 134 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 PSMD5Q16401 504 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 PARP15Q460N3 678 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 MS4A13Q5J8X5 152 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 RABGAP1LQ5R372 815 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 N4BP2L1Q5TBK1 243 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 MARC1Q5VT66 337 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SDHAF4Q5VUM1 108 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 RAB12Q6IQ22 244 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLC30A6Q6NXT4 461 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 CYB5D1Q6P9G0 228 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SH2D5Q6ZV89 423 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 NLRP9Q7RTR0 991 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ANKRD33Q7Z3H0 272 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 DNAJB7Q7Z6W7 309 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 COMMD2Q86X83 199 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 CRLF3Q8IUI8 442 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 NUDCD3Q8IVD9 361 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 UMODL1-AS1Q8N2C9 162 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 WDSUB1Q8N9V3 476 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 AVL9Q8NBF6 648 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 STKLD1Q8NE28 680 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 OR6C4Q8NGE1 309 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 OR13J1Q8NGT2 312 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 LRR1Q96L50 414 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 RPRD1AQ96P16 312 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 GCNAQ96QF7 691 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 ABHD1Q96SE0 405 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 LMF2Q9BU23 707 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 KIFC1Q9BW19 673 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 MRPL1Q9BYD6 325 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 BARHL1Q9BZE3 327 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 WWP1Q9H0M0 922 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLC25A51Q9H1U9 297 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 TBC1D17Q9HA65 648 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 UGT1A7Q9HAW7 530 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 UGT1A10Q9HAW8 530 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 UGT1A8Q9HAW9 530 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLC40A1Q9NP59 571 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 A4GALTQ9NPC4 353 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 SLCO1B3Q9NPD5 702 aa3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 IARS2Q9NSE4 1012 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 C20orf96Q9NUD7 363 aaPredicted RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 DDX18Q9NVP1 670 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 INTS10Q9NVR2 710 aaKnown RBP3.54□□□□□ -1.84
NEGR1-IT1-201ENST00000453121 RBM22Q9NW64 420 aaKnown RBP eCLIP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms