RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 PCGF2P35227 344 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 CCR9P51686 369 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 B2MP61769 119 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 HSF5Q4G112 596 aaPredicted RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 ZMAT1Q5H9K5 638 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 LIX1LQ8IVB5 337 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 FAM71E2Q8N5Q1 922 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 CLDN19Q8N6F1 224 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 RELL2Q8NC24 303 aaPredicted RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 OR52N2Q8NGI0 321 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 LINC01599Q8WXQ3 324 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 PPP1R16AQ96I34 528 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 CRTAC1Q9NQ79 661 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 FBXL4Q9UKA2 621 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 MRC1P22897 1456 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 A0A1W2PS29 197 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 PHOX2AO14813 284 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 TCAPO15273 167 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 PI15O43692 258 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 RENP00797 406 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 NQO2P16083 231 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 EDNRBP24530 442 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.84
LIN54-202ENST00000442461 BEX3Q00994 111 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 ZNF704Q6ZNC4 412 aaPredicted RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 TMCO2Q7Z6W1 182 aaPredicted RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 KDM8Q8N371 416 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 ARFGAP1Q8N6T3 406 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 OR4M1Q8NGD0 313 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 UCN3Q969E3 161 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 GOLGA2P5Q9HBQ8 144 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 HMX1Q9NP08 348 aaPredicted RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 LTB4R2Q9NPC1 389 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SLC22A11Q9NSA0 550 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 C19orf12Q9NSK7 152 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 TRDV1A0A1B0GX56 115 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 URADA6NGE7 173 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 GAPDHSO14556 408 aaPredicted RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 ONECUT3O60422 494 aaPredicted RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 HOXC8P31273 242 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 HAAOP46952 286 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 PREPP48147 710 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 STK19P49842 368 aaPredicted RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 IL13RA1P78552 427 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 GRM7Q14831 915 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RGNQ15493 299 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ODF4Q2M2E3 257 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 C3orf38Q5JPI3 329 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RGMBQ6NW40 437 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ZNF600Q6ZNG1 722 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 TTLL10Q6ZVT0 673 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 OTOP2Q7RTS6 562 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 LRRC56Q8IYG6 542 aaPredicted RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 NAGSQ8N159 534 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 DNAAF1Q8NEP3 725 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 GPRC5AQ8NFJ5 357 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 OR5M3Q8NGP4 307 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 NEK7Q8TDX7 302 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 CREB3L4Q8TEY5 395 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RNF32Q9H0A6 362 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 DEFB129Q9H1M3 183 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 FZD8Q9H461 694 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RIPK3Q9Y572 518 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 NRCAMQ92823 1304 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 BTBD17A6NE02 478 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 SYN3O14994 580 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ZNF208O43345 1280 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 DNAJB6O75190 326 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 CSO75390 466 aaKnown RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 FBXO24O75426 580 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 CBX7O95931 251 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ACP2P11117 423 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 PRDX3P30048 256 aaKnown RBP9.78□□□□□ -0.84
LIN54-202ENST00000442461 FABP9Q0Z7S8 132 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 TAZQ16635 292 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RAB6CQ53S08 254 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ZNF789Q5FWF6 425 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 C9orf152Q5JTZ5 239 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 KDELC1Q6UW63 502 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 NUDT18Q6ZVK8 323 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ZNF534Q76KX8 674 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 CDH26Q8IXH8 852 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 FAM86B1Q8N7N1 296 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 CAMKVQ8NCB2 501 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 PCED1BQ96HM7 432 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RAB6CQ9H0N0 254 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 TSPAN11A1L157 253 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 H3BSH0 61 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 GPR171O14626 319 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 FKTNO75072 461 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 RAB40ALP0C0E4 278 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ZNF823P16415 610 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 TACR2P21452 398 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 MTNR1BP49286 362 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 ARSDP51689 593 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 AP1S1P61966 158 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms