RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ACPTQ9BZG2 426 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 ASIC5Q9NY37 505 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 LRBAP50851 2863 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 CR1P17927 2039 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 A0A1W2PPR1 153 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 G3V3Y1 287 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 KLF4O43474 513 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 DNPH1O43598 174 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 SMPD2O60906 423 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 PGM3O95394 542 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 BMP5P22003 454 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 FKBP2P26885 142 aaKnown RBP5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 NKX6-1P78426 367 aaPredicted RBP5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 CPSF6Q16630 551 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 C3orf36Q3SXR2 165 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 ZNF474Q6S9Z5 364 aaPredicted RBP5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 SFXN5Q8TD22 340 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 PAFAH2Q99487 392 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 TRMOQ9BU70 441 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 HOXD1Q9GZZ0 328 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 GSTO2Q9H4Y5 243 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 MAPRE3Q9UPY8 281 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 SLC6A5Q9Y345 797 aa5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 CHD3Q12873 2000 aaKnown RBP5.61□□□□□ -1.51
SMARCAD1-203ENST00000394961 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SLC22A20A6NK97 555 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SAP18O00422 153 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PCDH7O60245 1069 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CTAGE8P0CG41 777 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 NEFHP12036 1026 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SERPINB5P36952 375 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 RPL3P39023 403 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PLTPP55058 493 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 FOXF2Q12947 444 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 KIAA0040Q15053 153 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 FAM111BQ6SJ93 734 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SEZ6L2Q6UXD5 910 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 GPRIN3Q6ZVF9 776 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 FAM214BQ7L5A3 538 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 P2RY8Q86VZ1 359 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CTAGE4Q8IX94 777 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CTAGE3PQ8IX95 158 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 RNF175Q8N4F7 328 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CEP70Q8NHQ1 597 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SELENOMQ8WWX9 145 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 MOAP1Q96BY2 351 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 KLHL29Q96CT2 875 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 GIMAP5Q96F15 307 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CCT7Q99832 543 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PTGES2Q9H7Z7 377 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 DCDC2Q9UHG0 476 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 ATP6V1HQ9UI12 483 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 UTS2RQ9UKP6 389 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PLEKHA6Q9Y2H5 1048 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SNUPNO95149 360 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CASQ1P31415 396 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 EIF1P41567 113 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 MAGEA8P43361 318 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 TRPC1P48995 793 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 RAC1P63000 192 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 LTBQ06643 244 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 KRTAP1-1Q07627 177 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 RNPS1Q15287 305 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CCDC153Q494R4 210 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 LRIG3Q6UXM1 1119 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 ZYG11AQ6WRX3 759 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 BEND4Q6ZU67 534 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 DTX2Q86UW9 622 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 C1orf52Q8N6N3 182 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 OR14L1PQ8NHC6 308 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 GFM2Q969S9 779 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 TMBIM1Q969X1 311 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 ZNF845Q96IR2 970 aaPredicted RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 MRPL1Q9BYD6 325 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 AMBRA1Q9C0C7 1298 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 DPH5Q9H2P9 285 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 KLRF1Q9NZS2 232 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 CPSF2Q9P2I0 782 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 DKKL1Q9UK85 242 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 A0A1W2PS29 197 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 C16orf97H3BN30 126 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 SIX3O95343 332 aaPredicted RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 FGF4P08620 206 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 KRT16P08779 473 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 DPP4P27487 766 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 IL12BP29460 328 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PTH2RP49190 550 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 C2orf54Q08AI8 447 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 TRMT12Q53H54 448 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PDSS1Q5T2R2 415 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 GTF2IRD2BQ6EKJ0 949 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 ESPNLQ6ZVH7 1005 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 GTF2IRD2Q86UP8 949 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 OR7G2Q8NG99 324 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PMM1Q92871 262 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 ELP4Q96EB1 424 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 PGM2Q96G03 612 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 HBEGFQ99075 208 aa5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 IQCGQ9H095 443 aaKnown RBP5.6□□□□□ -1.51
SMARCAD1-203ENST00000394961 BCO1Q9HAY6 547 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms