RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 DNAJC15Q9Y5T4 150 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 NPHS1O60500 1241 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 RCBTB2O95199 551 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 IL33O95760 270 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 DPP4P27487 766 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 UQCRC1P31930 480 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 PSMD4P55036 377 aaKnown RBP16.1■□□□□ 0.17
HDDC3-201ENST00000330334 ZNF155Q12901 538 aaPredicted RBP16.1■□□□□ 0.17
HDDC3-201ENST00000330334 KANK2Q63ZY3 851 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 TRABD2AQ86V40 505 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 TMEM200AQ86VY9 491 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 KIF18BQ86Y91 864 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 APOPT1Q96IL0 206 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 TUBA1CQ9BQE3 449 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 ROPN1BQ9BZX4 212 aaPredicted RBP16.1■□□□□ 0.17
HDDC3-201ENST00000330334 TUBB1Q9H4B7 451 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 ROPN1Q9HAT0 212 aaPredicted RBP16.1■□□□□ 0.17
HDDC3-201ENST00000330334 C3orf14Q9HBI5 128 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 FAM120CQ9NX05 1096 aaKnown RBP16.1■□□□□ 0.17
HDDC3-201ENST00000330334 LGALS13Q9UHV8 139 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 ITGB1BP2Q9UKP3 347 aa16.1■□□□□ 0.17
HDDC3-201ENST00000330334 MED12Q93074 2177 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 TLDC2A0PJX2 215 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 B4DXG7 233 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 LINC01387J3KSC0 135 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 ZNF708P17019 499 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 MAP3K8P41279 467 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 FRKP42685 505 aaPredicted RBP16.09■□□□□ 0.17
HDDC3-201ENST00000330334 SORDQ00796 357 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 PDE7AQ13946 482 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 GANABQ14697 944 aaKnown RBP16.09■□□□□ 0.17
HDDC3-201ENST00000330334 DAZAP2Q15038 168 aaPredicted RBP16.09■□□□□ 0.17
HDDC3-201ENST00000330334 UGT3A2Q3SY77 523 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 RFTN2Q52LD8 501 aaPredicted RBP16.09■□□□□ 0.17
HDDC3-201ENST00000330334 OR5M10Q6IEU7 315 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 C9orf106Q8NAJ2 232 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 OR2T11Q8NH01 316 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 CEP70Q8NHQ1 597 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 SFXN2Q96NB2 322 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 G6PC3Q9BUM1 346 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 SFXN3Q9BWM7 321 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 ACBD3Q9H3P7 528 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 REEP4Q9H6H4 257 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 EML4Q9HC35 981 aaKnown RBP16.09■□□□□ 0.17
HDDC3-201ENST00000330334 HHATLQ9HCP6 504 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 ACSS1Q9NUB1 689 aaPredicted RBP16.09■□□□□ 0.17
HDDC3-201ENST00000330334 CRIM1Q9NZV1 1036 aa16.09■□□□□ 0.17
HDDC3-201ENST00000330334 H0Y3Z8 333 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 LSM1O15116 133 aaKnown RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 PDPK1O15530 556 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 TMIGD3P0DMS9 266 aaPredicted RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 PRPS2P11908 318 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 SDC1P18827 310 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 ALDH3A1P30838 453 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 SERPINB5P36952 375 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 ASMTP46597 345 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 CLK3P49761 638 aaKnown RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 CLDN18P56856 261 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 B3GALT5-AS1P59052 145 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 GLYR1Q49A26 553 aaPredicted RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 FLYWCH1Q4VC44 716 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 ZZZ3Q8IYH5 903 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 OR4K17Q8NGC6 315 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 OR2W6PQ8NHA6 318 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 GOT1L1Q8NHS2 421 aaPredicted RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 ZFP28Q8NHY6 868 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 MTERF3Q96E29 417 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 ZBED6CLQ96FA7 236 aaPredicted RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 RASSF1Q9NS23 344 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 DNAJB12Q9NXW2 375 aaKnown RBP16.08■□□□□ 0.16
HDDC3-201ENST00000330334 PPP4R1LQ9P1A2 415 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 CLCF1Q9UBD9 225 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 DKKL1Q9UK85 242 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 TRAF6Q9Y4K3 522 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 PTGDR2Q9Y5Y4 395 aa16.08■□□□□ 0.16
HDDC3-201ENST00000330334 IGLV3-32A0A0A0MS00 114 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 CLCA1A8K7I4 914 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 HCRTR2O43614 444 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 LINC00032P0C843 101 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 PEPDP12955 493 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 DDX5P17844 614 aaKnown RBP16.07■□□□□ 0.16
HDDC3-201ENST00000330334 GABRA3P34903 492 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 STARP49675 285 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 DGKQP52824 942 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 SRYQ05066 204 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 VPS26BQ4G0F5 336 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 ARL13AQ5H913 290 aaPredicted RBP16.07■□□□□ 0.16
HDDC3-201ENST00000330334 SH2D4BQ5SQS7 431 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 ZNF551Q7Z340 670 aaPredicted RBP16.07■□□□□ 0.16
HDDC3-201ENST00000330334 OR2M3Q8NG83 312 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 NINJ1Q92982 152 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 PPCDCQ96CD2 204 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 PTGES2Q9H7Z7 377 aa16.07■□□□□ 0.16
HDDC3-201ENST00000330334 TUBAL3A6NHL2 446 aa16.06■□□□□ 0.16
HDDC3-201ENST00000330334 A6NNC1 897 aa16.06■□□□□ 0.16
HDDC3-201ENST00000330334 NKX2-2O95096 273 aa16.06■□□□□ 0.16
HDDC3-201ENST00000330334 GOSR1O95249 250 aa16.06■□□□□ 0.16
HDDC3-201ENST00000330334 KCNH1O95259 989 aa16.06■□□□□ 0.16
HDDC3-201ENST00000330334 CRHP06850 196 aa16.06■□□□□ 0.16
HDDC3-201ENST00000330334 EPXP11678 715 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms