RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PRAMEF8Q5VWM4 474 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 PRAMEF7Q5VXH5 474 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 RTL4Q6ZR62 310 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 Q6ZS92 163 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 SERPINA11Q86U17 422 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 CYP4Z2PQ8N1L4 340 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 C10orf111Q8N326 155 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 ZADH2Q8N4Q0 377 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 METTL25Q8N6Q8 603 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 LSM14AQ8ND56 463 aaKnown RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 PNPT1Q8TCS8 783 aaKnown RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 COL21A1Q96P44 957 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 TRNT1Q96Q11 434 aaKnown RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 SDF2Q99470 211 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 SLC39A3Q9BRY0 314 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 SPATA9Q9BWV2 254 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 ZNF350Q9GZX5 532 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 IL1RL2Q9HB29 575 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 NDE1Q9NXR1 346 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 LRFN1Q9P244 771 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 ABCD2Q9UBJ2 740 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 TP53TG5Q9Y2B4 290 aa12.98□□□□□ -0.33
VPS25-201ENST00000253794 CHCHD2Q9Y6H1 151 aaPredicted RBP12.98□□□□□ -0.33
VPS25-201ENST00000253794 BOD1L1Q8NFC6 3051 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 NPIPB9F8W1W9 429 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 TP53I11O14683 189 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 UGT2B11O75310 529 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 TFPTP0C1Z6 253 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ARAFP10398 606 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 KRT20P35900 424 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 CPOXP36551 454 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 CRATP43155 626 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 MTPNP58546 118 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ARG2P78540 354 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 RBBP4Q09028 425 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 SNTA1Q13424 505 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ART3Q13508 389 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 OR1C1Q15619 314 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ADRM1Q16186 407 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 RABL3Q5HYI8 236 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ANGPTL8Q6UXH0 198 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 IL20RBQ6UXL0 311 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ASB18Q6ZVZ8 466 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 CALHM3Q86XJ0 350 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 RBMXL3Q8N7X1 1067 aaKnown RBP12.97□□□□□ -0.33
VPS25-201ENST00000253794 SPPL2AQ8TCT8 520 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 RAB8BQ92930 207 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 TMEM125Q96AQ2 219 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 OTUB1Q96FW1 271 aaPredicted RBP12.97□□□□□ -0.33
VPS25-201ENST00000253794 SCMH1Q96GD3 660 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 SIGLEC12Q96PQ1 595 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 C1orf21Q9H246 121 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 CNIH4Q9P003 139 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 P2RX2Q9UBL9 471 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 ABCG2Q9UNQ0 655 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
VPS25-201ENST00000253794 EXPH5Q8NEV8 1989 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 DSPPQ9NZW4 1301 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 TRAV17A0A0B4J275 112 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 ADAM10O14672 748 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 NME2P1O60361 137 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 REM1O75628 298 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 SLC25A12O75746 678 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 UBOX5O94941 541 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CYP4B1P13584 511 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 NME2P22392 152 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 IL12BP29460 328 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CPA2P48052 419 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CD97P48960 835 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 CASP9P55211 416 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 FBXW4P57775 412 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 RPP38P78345 283 aaKnown RBP12.96□□□□□ -0.33
VPS25-201ENST00000253794 GNA13Q14344 377 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 GCNT6Q5T4J0 391 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 LRRC74BQ6ZQY2 392 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 C16orf62Q7Z3J2 963 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 PTOV1Q86YD1 416 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 PGAM4Q8N0Y7 254 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 FBXW8Q8N3Y1 598 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 OR10G3Q8NGC4 313 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 SLC38A5Q8WUX1 472 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 EFHD2Q96C19 240 aaPredicted RBP12.96□□□□□ -0.33
VPS25-201ENST00000253794 TMCO6Q96DC7 493 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 FRMD6Q96NE9 622 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 UBL7Q96S82 380 aaPredicted RBP12.96□□□□□ -0.33
VPS25-201ENST00000253794 ADOQ96SZ5 270 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 THUMPD3Q9BV44 507 aaKnown RBP12.96□□□□□ -0.33
VPS25-201ENST00000253794 SLC25A18Q9H1K4 315 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 BCL2L10Q9HD36 194 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 SPAG4Q9NPE6 437 aa12.96□□□□□ -0.33
VPS25-201ENST00000253794 TIMMDC1Q9NPL8 285 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms