RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 COL5A1P20908 1838 aaPredicted RBP16.86■□□□□ 0.29
VIM-201ENST00000224237 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 TCRBV16S1A1N1A0A5B0 115 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 AGAP5A6NIR3 686 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 SLC16A6O15403 523 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 UGT2B17O75795 530 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
VIM-201ENST00000224237 GUSBP08236 651 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 IL1RL1Q01638 556 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 EIPR1Q53HC9 387 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 AP1ARQ63HQ0 302 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 PWWP2BQ6NUJ5 590 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 B3GNT8Q7Z7M8 397 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 C16orf52Q8NHV5 167 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 RHBDD1Q8TEB9 315 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 NR4A3Q92570 626 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 PRRC1Q96M27 445 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 FEVQ99581 238 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 Q9N2J8 555 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 FTSJ1Q9UET6 329 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 A4GNTQ9UNA3 340 aa16.85■□□□□ 0.29
VIM-201ENST00000224237 GXYLT2A0PJZ3 443 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 MITFO75030 526 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 UGT2B11O75310 529 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 CCNB2O95067 398 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 KCNK2O95069 426 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 TIAF1O95411 115 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 DBIP07108 87 aaKnown RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 TRHRP34981 398 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 RORAP35398 523 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 IL18R1Q13478 541 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 ELAVL1Q15717 326 aaKnown RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 LIN52Q52LA3 116 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 LAIR1Q6GTX8 287 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 FIGNL1Q6PIW4 674 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 COX15Q7KZN9 410 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 C8orf59Q8N0T1 100 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 ZNF615Q8N8J6 731 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 PTPMT1Q8WUK0 201 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 CLIP3Q96DZ5 547 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 RMND5BQ96G75 393 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 MUS81Q96NY9 551 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 TMCC3Q9ULS5 477 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 DTX4Q9Y2E6 619 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 MYRFQ9Y2G1 1151 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 HCN4Q9Y3Q4 1203 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 CHST2Q9Y4C5 530 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 PCDHGA8Q9Y5G5 932 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 CLCA3PQ9Y6N3 262 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 IGLV3-12A0A075B6K2 115 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 PCDH17O14917 1159 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 NUBP1P53384 320 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 TPD52P55327 224 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 ZFP36L1Q07352 338 aaKnown RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 IL11RAQ14626 422 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 NSDHLQ15738 373 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 FGD3Q5JSP0 725 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 DCST1Q5T197 706 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 RNF220Q5VTB9 566 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 TTC33Q6PID6 262 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 ISLR2Q6UXK2 745 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 ZNF836Q6ZNA1 936 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 TMEM151BQ8IW70 566 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 SLC5A8Q8N695 610 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 SLC38A9Q8NBW4 561 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 AGBL5Q8NDL9 886 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 SENP5Q96HI0 755 aaPredicted RBP16.84■□□□□ 0.29
VIM-201ENST00000224237 VN1R1Q9GZP7 353 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 RIBC2Q9H4K1 309 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 CTSFQ9UBX1 484 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 MKL2Q9ULH7 1088 aa16.84■□□□□ 0.29
VIM-201ENST00000224237 A0A1W2PRQ8 180 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 H3BNH8 94 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 CDX4O14627 284 aaPredicted RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 GDF9O60383 454 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 SEC24DO94855 1032 aaPredicted RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 OXSR1O95747 527 aaPredicted RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 CLPSP04118 112 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 FGF5P12034 268 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 NID1P14543 1247 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 ELAVL4P26378 380 aaKnown RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 RPS6KA3P51812 740 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 EEF1A1P68104 462 aaKnown RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 PIN1Q13526 163 aaPredicted RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 DGCR6Q14129 220 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 KEAP1Q14145 624 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 NPTX1Q15818 432 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 NKAIN1Q4KMZ8 207 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 PLPP5Q8NEB5 264 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 OR9Q2Q8NGE9 314 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 FNDC11Q9BVV2 318 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 GRIP2Q9C0E4 1043 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 ZNF556Q9HAH1 456 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 PAPOLBQ9NRJ5 636 aaKnown RBP16.83■□□□□ 0.28
VIM-201ENST00000224237 SLC22A11Q9NSA0 550 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 FBXO34Q9NWN3 711 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 OCIAD1Q9NX40 245 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 CFL2Q9Y281 166 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 POFUT2Q9Y2G5 429 aa16.83■□□□□ 0.28
VIM-201ENST00000224237 TRBV4-1A0A0J9YWV2 114 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms