RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Sec23bQ9D662 767 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Trpv4Q9EPK8 871 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Naa10Q9QY36 235 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gm10608E9PZ13 166 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 2610001J05RikF2Z3Y9 59 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Klrg1O88713 188 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Tp63O88898 680 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 AdaP03958 352 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Olfr6P34986 316 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Dlk1Q09163 385 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gm1123Q1RME4 390 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cmpk2Q3U5Q7 447 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gm5460Q3UQ97 254 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Nlrc3Q5DU56 1064 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gemin8Q8BHE1 238 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Znf322Q8BZ89 410 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Frs2Q8C180 508 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Q8K039 155 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 CipcQ8R0W1 432 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Slc22a6Q8VC69 545 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Chchd4Q8VEA4 139 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Usb1Q91W78 267 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 2410137M14RikQ9CWF0 162 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Mgme1Q9CXC3 338 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Tprg1lQ9DBS2 266 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Dusp13Q9QYJ7 198 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Ephb6O08644 1014 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Acvr2aP27038 513 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 FauP35545 74 aaKnown RBP13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Drd2P61168 444 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Med26Q7TN02 588 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Olfr1045Q7TR80 315 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 GalpQ810H5 117 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cdh7Q8BM92 785 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Klhl24Q8BRG6 600 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cnot2Q8C5L3 540 aaKnown RBP13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Prps1l1Q8C5R8 318 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Znf628Q8CJ78 1038 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Mchr1Q8JZL2 353 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Vmn1r38Q8R2E1 302 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Rwdd2bQ99M03 290 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cdk20Q9JHU3 346 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Dclk1Q9JLM8 756 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Psma6Q9QUM9 246 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cacna1cQ01815 2139 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 D3Ertd254eA0A0G2JEM5 796 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Ino80eA0A0U1RP99 260 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gm21936A0A1Y7VJE9 144 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Tmem235B1AQL3 211 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Zfp384E9Q1A5 584 aaKnown RBP13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Omt2aF6ZJR3 104 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Abcb1aP21447 1276 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Man2a1P27046 1150 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Tm9sf2P58021 662 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Wbp2P97765 261 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Tgfbr2Q62312 592 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gpr20Q8BYC4 358 aa13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gatad2aQ8CHY6 629 aaKnown RBP13.13□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Zfp978A2A7I1 335 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Gm6460F6YJZ8 199 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 E2f3O35261 457 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Brd7O88665 651 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Ca3P16015 260 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 RoraP51448 523 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Grm7Q68ED2 915 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Polr2mQ6P6I6 366 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 PrlhrQ6VMN6 370 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Dlgap5Q8K4R9 808 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Olfr1250Q8VGM3 314 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Prdm9Q96EQ9 843 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Tmed9Q99KF1 235 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cdca5Q9CPY3 264 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Msantd3Q9CR78 275 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Cmss1Q9CZT6 276 aaKnown RBP13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Fam43bA2AM80 330 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Vmn1r184E9Q2N4 314 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 P01807 119 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Agtr1aP29754 359 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Ypel5P62700 121 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 XkrxQ5GH68 449 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 LpoQ5SW46 710 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 ClpbQ60649 677 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Flrt2Q8BLU0 660 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 B130006D01RikQ8BRH6 153 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Phf11aQ8BVM9 293 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Zc2hc1cQ8CCG1 527 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 SvbpQ99LQ4 66 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Acad8Q9D7B6 413 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Med8Q9D7W5 268 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 ChadlE9Q7T7 748 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Ikzf2P81183 526 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Arhgap9Q1HDU4 648 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Xrcc1Q60596 631 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 HepacamQ640R3 418 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Slc6a7Q6PGE7 637 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Adamtsl2Q7TSK7 957 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 AgmoQ8BS35 447 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Nfatc4Q8K120 901 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 ManbaQ8K2I4 879 aa13.12□□□□□ -0.31
Pcdha1-202ENSMUST00000193839 Olfr807Q8VGI9 311 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms