Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Gm25239-201ENSMUST00000174915 86 ntBASIC37.33■■■■□ 3.57
Msantd3Q9CR78 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Msantd3Q9CR78 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Msantd3Q9CR78 Gm15042-201ENSMUST00000120212 883 ntBASIC32.52■■■□□ 2.8
Msantd3Q9CR78 Gm24109-201ENSMUST00000175489 103 ntBASIC32.38■■■□□ 2.77
Msantd3Q9CR78 Gm15045-201ENSMUST00000117359 883 ntBASIC31.71■■■□□ 2.67
Msantd3Q9CR78 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Msantd3Q9CR78 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Msantd3Q9CR78 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Msantd3Q9CR78 Gm23366-201ENSMUST00000175022 89 ntBASIC31.25■■■□□ 2.59
Msantd3Q9CR78 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Msantd3Q9CR78 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Msantd3Q9CR78 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Msantd3Q9CR78 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Msantd3Q9CR78 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.23■■■□□ 2.43
Msantd3Q9CR78 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Msantd3Q9CR78 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
Msantd3Q9CR78 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.96■■■□□ 2.39
Msantd3Q9CR78 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Msantd3Q9CR78 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
Msantd3Q9CR78 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Msantd3Q9CR78 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Msantd3Q9CR78 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.63■■■□□ 2.33
Msantd3Q9CR78 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Msantd3Q9CR78 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Msantd3Q9CR78 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.5■■■□□ 2.31
Msantd3Q9CR78 Gm25238-201ENSMUST00000174914 89 ntBASIC29.46■■■□□ 2.31
Msantd3Q9CR78 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Msantd3Q9CR78 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Msantd3Q9CR78 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Msantd3Q9CR78 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Msantd3Q9CR78 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
Msantd3Q9CR78 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Msantd3Q9CR78 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.04■■■□□ 2.24
Msantd3Q9CR78 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Msantd3Q9CR78 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Msantd3Q9CR78 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Msantd3Q9CR78 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.75■■■□□ 2.19
Msantd3Q9CR78 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.73■■■□□ 2.19
Msantd3Q9CR78 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Msantd3Q9CR78 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Msantd3Q9CR78 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Msantd3Q9CR78 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Msantd3Q9CR78 Gm27325-201ENSMUST00000175467 74 ntBASIC28.46■■■□□ 2.15
Msantd3Q9CR78 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.44■■■□□ 2.14
Msantd3Q9CR78 Gm25262-201ENSMUST00000174934 133 ntBASIC28.43■■■□□ 2.14
Msantd3Q9CR78 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.41■■■□□ 2.14
Msantd3Q9CR78 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Msantd3Q9CR78 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.11■■■□□ 2.09
Msantd3Q9CR78 Rab21-202ENSMUST00000218831 843 ntBASIC28.11■■■□□ 2.09
Msantd3Q9CR78 Psd-208ENSMUST00000224556 2034 ntBASIC28.09■■■□□ 2.09
Msantd3Q9CR78 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Msantd3Q9CR78 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.03■■■□□ 2.08
Msantd3Q9CR78 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Msantd3Q9CR78 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.98■■■□□ 2.07
Msantd3Q9CR78 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Msantd3Q9CR78 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.89■■■□□ 2.06
Msantd3Q9CR78 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.89■■■□□ 2.06
Msantd3Q9CR78 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Msantd3Q9CR78 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Msantd3Q9CR78 Gm26115-201ENSMUST00000175605 87 ntBASIC27.79■■■□□ 2.04
Msantd3Q9CR78 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Msantd3Q9CR78 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Msantd3Q9CR78 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Msantd3Q9CR78 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Msantd3Q9CR78 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Msantd3Q9CR78 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Msantd3Q9CR78 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Msantd3Q9CR78 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.54■■■□□ 2
Msantd3Q9CR78 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.54■■■□□ 2
Msantd3Q9CR78 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.53■■■□□ 2
Msantd3Q9CR78 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Msantd3Q9CR78 Gm8109-201ENSMUST00000194076 746 ntBASIC27.52■■■□□ 2
Msantd3Q9CR78 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Msantd3Q9CR78 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
Msantd3Q9CR78 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
Msantd3Q9CR78 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.45■■□□□ 1.98
Msantd3Q9CR78 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Msantd3Q9CR78 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Msantd3Q9CR78 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Msantd3Q9CR78 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Msantd3Q9CR78 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Msantd3Q9CR78 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Msantd3Q9CR78 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Msantd3Q9CR78 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Msantd3Q9CR78 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Msantd3Q9CR78 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Msantd3Q9CR78 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.17■■□□□ 1.94
Msantd3Q9CR78 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Msantd3Q9CR78 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.13■■□□□ 1.93
Msantd3Q9CR78 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Msantd3Q9CR78 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Msantd3Q9CR78 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.08■■□□□ 1.93
Msantd3Q9CR78 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Msantd3Q9CR78 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.92
Msantd3Q9CR78 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.98■■□□□ 1.91
Msantd3Q9CR78 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Msantd3Q9CR78 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Msantd3Q9CR78 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Msantd3Q9CR78 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms