RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SLC17A9Q9BYT1 436 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 SLC38A1Q9H2H9 487 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 SNTG1Q9NSN8 517 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 SACM1LQ9NTJ5 587 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 OR6C2Q9NZP2 312 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 NPAP1Q9NZP6 1156 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 CAB39Q9Y376 341 aaPredicted RBP7.57□□□□□ -1.2
GPC3-204ENST00000631057 CMAHPQ9Y471 501 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 PLEKHM1Q9Y4G2 1056 aa7.57□□□□□ -1.2
GPC3-204ENST00000631057 SPIN1Q9Y657 262 aaPredicted RBP7.57□□□□□ -1.2
GPC3-204ENST00000631057 MKI67P46013 3256 aaKnown RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 SLC35F4A4IF30 521 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PRR23AA6NEV1 266 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 ANTXRLA6NF34 631 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 DUXAA6NLW8 204 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 WASHC1A8K0Z3 465 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 ISM1B1AKI9 464 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 KDM4EB2RXH2 506 aaPredicted RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 AP3D1O14617 1153 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 SLC30A4O14863 429 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PLRG1O43660 514 aaKnown RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 DYRK3O43781 588 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 OR5F1O95221 314 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 CHRM5P08912 532 aaPredicted RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 C8orf89P0DMQ9 161 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 STAT5AP42229 794 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 CASP3P42574 277 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 TNFRSF4P43489 277 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 MTNR1AP48039 350 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 RAB8AP61006 207 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PSPHP78330 225 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 BNC1Q01954 994 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 CHRNEQ04844 493 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 TPBGQ13641 420 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 DECR1Q16698 335 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 FAM214AQ32MH5 1076 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 ZNF750Q32MQ0 723 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 ITPRIPL2Q3MIP1 535 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PLK5Q496M5 336 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 C2orf27AQ580R0 203 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PAQR6Q6TCH4 344 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 WASH2PQ6VEQ5 465 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PLEKHM3Q6ZWE6 761 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 GDPD3Q7L5L3 318 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 HMGN2P46Q86SG4 172 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 PAQR7Q86WK9 346 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 CACTIN-AS1Q8N1I8 211 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 TOR1AIP2Q8NFQ8 470 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 OR9A2Q8NGT5 310 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 OR14C36Q8NHC7 312 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 ASB15Q8WXK1 588 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 DIO2Q92813 273 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 UFD1Q92890 307 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 RFKQ969G6 155 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 SLC25A46Q96AG3 418 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 CHFRQ96EP1 664 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 KCTD7Q96MP8 289 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 ZNF681Q96N22 645 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 MS4A4EQ96PG1 132 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 HS3ST6Q96QI5 342 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 OR2M4Q96R27 311 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 NELL2Q99435 816 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 GPA33Q99795 319 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 MACROD1Q9BQ69 325 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 TRMT61BQ9BVS5 477 aaKnown RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 BARHL1Q9BZE3 327 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 SAP130Q9H0E3 1048 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 FBRSQ9HAH7 460 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 EQTNQ9NQ60 294 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 MED17Q9NVC6 651 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 TXNL4BQ9NX01 149 aaKnown RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 FBXL12Q9NXK8 326 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 SPHK1Q9NYA1 384 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 NTMQ9P121 344 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 APOBEC3BQ9UH17 382 aaKnown RBP7.56□□□□□ -1.2
GPC3-204ENST00000631057 PHF11Q9UIL8 331 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 GRIP1Q9Y3R0 1128 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 F5P12259 2224 aa7.56□□□□□ -1.2
GPC3-204ENST00000631057 CPSF4LA6NMK7 179 aaKnown RBP7.55□□□□□ -1.2
GPC3-204ENST00000631057 WWP2O00308 870 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 CDRT1O95170 752 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 HOXC4P09017 264 aaPredicted RBP7.55□□□□□ -1.2
GPC3-204ENST00000631057 HOXB3P14651 431 aaPredicted RBP7.55□□□□□ -1.2
GPC3-204ENST00000631057 MAGP20916 626 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 FPR3P25089 353 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 PTGER1P34995 402 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 SLC9A3P48764 834 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 GAS1P54826 345 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 RGS8P57771 180 aaPredicted RBP7.55□□□□□ -1.2
GPC3-204ENST00000631057 ERVK-21P61565 698 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 BTN3A2P78410 334 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 TNFRSF17Q02223 184 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 HNRNPA0Q13151 305 aaKnown RBP7.55□□□□□ -1.2
GPC3-204ENST00000631057 EIPR1Q53HC9 387 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 ARMC4Q5T2S8 1044 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 HEPHL1Q6MZM0 1159 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 CDC73Q6P1J9 531 aa7.55□□□□□ -1.2
GPC3-204ENST00000631057 HSDL2Q6YN16 418 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms