RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CYP27C1Q4G0S4 372 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 CCNJQ5T5M9 372 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 AP1ARQ63HQ0 302 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 TYW3Q6IPR3 259 aaKnown RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 NPSR1Q6W5P4 371 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 TSEN54Q7Z6J9 526 aaKnown RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 ZNF321PQ8N8H1 164 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 ART5Q96L15 291 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 ZNF184Q99676 751 aaPredicted RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 OR8D2Q9GZM6 311 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 SAP130Q9H0E3 1048 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 NXT1Q9UKK6 140 aaKnown RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 CNOT11Q9UKZ1 510 aaKnown RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 WDR45Q9Y484 360 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 FAM186AA6NE01 2351 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 SAC3D1A6NKF1 404 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 PLD2O14939 933 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 CT45A8P0DMV1 189 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 CT45A9P0DMV2 189 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 ZNF26P17031 533 aaPredicted RBP19.3■□□□□ 0.68
PNKP-203ENST00000593946 SLC5A2P31639 672 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 OR1E2P47887 323 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 EMP2P54851 167 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 SFT2D3Q587I9 215 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 CT45A2Q5DJT8 189 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 FAAH2Q6GMR7 532 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 FAM199XQ6PEV8 388 aaPredicted RBP19.3■□□□□ 0.68
PNKP-203ENST00000593946 ANKRD37Q7Z713 158 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 GALNT6Q8NCL4 622 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 MR1Q95460 341 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 TMBIM1Q969X1 311 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 ZG16BQ96DA0 208 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 ZNF354BQ96LW1 612 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 SLC46A1Q96NT5 459 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 QRSL1Q9H0R6 528 aaKnown RBP19.3■□□□□ 0.68
PNKP-203ENST00000593946 MTHFD2LQ9H903 347 aaPredicted RBP19.3■□□□□ 0.68
PNKP-203ENST00000593946 THSD1Q9NS62 852 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 NDUFAF4Q9P032 175 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 C3orf18Q9UK00 162 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 MKLN1Q9UL63 735 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 SH3GLB1Q9Y371 365 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 LRRC42Q9Y546 428 aa19.3■□□□□ 0.68
PNKP-203ENST00000593946 TEX51A0A1B0GUA7 166 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 ACOX3O15254 700 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 STX11O75558 287 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 STK17BO94768 372 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 KCNK2O95069 426 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 ALPPP05187 535 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 KCNC4Q03721 635 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 PUM1Q14671 1186 aaKnown RBP eCLIP19.29■□□□□ 0.68
PNKP-203ENST00000593946 OR2T5Q6IEZ7 315 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 MORN4Q8NDC4 146 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 OR2T29Q8NH02 315 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 PROX1Q92786 737 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 BTBD9Q96Q07 612 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 CRB3Q9BUF7 120 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 C9orf16Q9BUW7 83 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 ITPAQ9BY32 194 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 COQ10BQ9H8M1 238 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 GPN3Q9UHW5 284 aaPredicted RBP19.29■□□□□ 0.68
PNKP-203ENST00000593946 C15orf41Q9Y2V0 281 aa19.29■□□□□ 0.68
PNKP-203ENST00000593946 CNOT1A5YKK6 2376 aaKnown RBP19.29■□□□□ 0.68
PNKP-203ENST00000593946 C9J4A7 227 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 DPM1O60762 260 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 GUSBP08236 651 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 PABPC4LP0CB38 370 aaKnown RBP19.28■□□□□ 0.68
PNKP-203ENST00000593946 TRHRP34981 398 aaPredicted RBP19.28■□□□□ 0.68
PNKP-203ENST00000593946 AQP4P55087 323 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 ZBTB49Q6ZSB9 765 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 HMGN2P46Q86SG4 172 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 METTL21AQ8WXB1 218 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 DNAJC9Q8WXX5 260 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 RMND5BQ96G75 393 aaPredicted RBP19.28■□□□□ 0.68
PNKP-203ENST00000593946 SLC29A1Q99808 456 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 PINK1Q9BXM7 581 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 POLE3Q9NRF9 147 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 FBXO34Q9NWN3 711 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 CFL2Q9Y281 166 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 GPR55Q9Y2T6 319 aaPredicted RBP19.28■□□□□ 0.68
PNKP-203ENST00000593946 PCDHGA3Q9Y5H0 932 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 SOCS2O14508 198 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 GNGT2O14610 69 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 KIAA0513O60268 411 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 BRINP1O60477 761 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 DIRAS1O95057 198 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 EPPINO95925 133 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 FTH1P19P0C7X4 201 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 ZNF23P17027 643 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 NCF4Q15080 339 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 PPP4R4Q6NUP7 873 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 FIGNL1Q6PIW4 674 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 TMEM205Q6UW68 189 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 COMTD1Q86VU5 262 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 ZNF619Q8N2I2 560 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 ZSCAN1Q8NBB4 408 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 OR4N2Q8NGD1 307 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 OR1N1Q8NGS0 311 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 PMM1Q92871 262 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 ZNF300Q96RE9 604 aaPredicted RBP19.28■□□□□ 0.68
PNKP-203ENST00000593946 NUDT9Q9BW91 350 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms