RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CYP27C1Q4G0S4 372 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 EIPR1Q53HC9 387 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 CT45A2Q5DJT8 189 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 WIPI1Q5MNZ9 446 aaPredicted RBP6.92□□□□□ -1.3
NPC1-208ENST00000590301 RNF165Q6ZSG1 346 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 LARP4Q71RC2 724 aaKnown RBP eCLIP6.92□□□□□ -1.3
NPC1-208ENST00000590301 IFNEQ86WN2 208 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 PLCZ1Q86YW0 608 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 ANKK1Q8NFD2 765 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 OR9A2Q8NGT5 310 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 OR14L1PQ8NHC6 308 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.92□□□□□ -1.3
NPC1-208ENST00000590301 NINJ1Q92982 152 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 TMBIM1Q969X1 311 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 TRIM44Q96DX7 344 aaPredicted RBP6.92□□□□□ -1.3
NPC1-208ENST00000590301 APIPQ96GX9 242 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 WDYHV1Q96HA8 205 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 NODALQ96S42 347 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 ADOQ96SZ5 270 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 TM9SF2Q99805 663 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 SH3GL2Q99962 352 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 SFXN3Q9BWM7 321 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 EPB41L4BQ9H329 900 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 SERHLQ9NQF3 203 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 SDHAF3Q9NRP4 125 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 TAS2R10Q9NYW0 307 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 TBK1Q9UHD2 729 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 EMCNQ9ULC0 261 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 ABCG2Q9UNQ0 655 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 C19orf53Q9UNZ5 99 aaPredicted RBP6.92□□□□□ -1.3
NPC1-208ENST00000590301 SLC6A5Q9Y345 797 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 OR10H1Q9Y4A9 318 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 TIMM22Q9Y584 194 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 WIF1Q9Y5W5 379 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 MTORP42345 2549 aa6.92□□□□□ -1.3
NPC1-208ENST00000590301 NCOA6Q14686 2063 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 ZGRF1Q86YA3 2104 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 H0Y3Z8 333 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 SLC28A1O00337 649 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 UBFD1O14562 309 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 COPEO14579 308 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 RGS14O43566 566 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CTAG2O75638 210 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 PSMG1O95456 288 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CHEK2O96017 543 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CRHP06850 196 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CPA3P15088 417 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 PRPH2P23942 346 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 UQCRC1P31930 480 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 PTGDSP41222 190 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 PCYT1AP49585 367 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CLK3P49761 638 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 NCBP2P52298 156 aaKnown RBP eCLIP6.91□□□□□ -1.3
NPC1-208ENST00000590301 ZNF136P52737 540 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 PSMD4P55036 377 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 GFRA1P56159 465 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 DSCR4P56555 118 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 CORO7P57737 925 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 EEFSECP57772 596 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 C2orf80Q0P641 193 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 ZNF155Q12901 538 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 GAB1Q13480 694 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 GANABQ14697 944 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 DAZAP2Q15038 168 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 DECR1Q16698 335 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 VPS26BQ4G0F5 336 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 FLYWCH1Q4VC44 716 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 LIPMQ5VYY2 423 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 OR2A2Q6IF42 318 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 FAM71E1Q6IPT2 247 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 NOXRED1Q6NXP6 359 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 SH2D5Q6ZV89 423 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 ADGRE4PQ86SQ3 457 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 YRDCQ86U90 279 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 SLC44A2Q8IWA5 706 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 OR2L13Q8N349 312 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 RIBC1Q8N443 379 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 WDSUB1Q8N9V3 476 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 RELL2Q8NC24 303 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 NAXEQ8NCW5 288 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 SIMC1Q8NDZ2 872 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 TNIP2Q8NFZ5 429 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 OR7G2Q8NG99 324 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 GOT1L1Q8NHS2 421 aaPredicted RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 KAT2AQ92830 837 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 KCNA7Q96RP8 456 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 TRIB1Q96RU8 372 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 PIGMQ9H3S5 423 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 FOLH1BQ9HBA9 442 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 C3orf14Q9HBI5 128 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 GALNT9Q9HCQ5 603 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 Q9N2J8 555 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 RASSF1Q9NS23 344 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 DDX18Q9NVP1 670 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 OXSMQ9NWU1 459 aa6.91□□□□□ -1.3
NPC1-208ENST00000590301 FAM120CQ9NX05 1096 aaKnown RBP6.91□□□□□ -1.3
NPC1-208ENST00000590301 MKS1Q9NXB0 559 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms